RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 IREB2P48200 963 aaKnown RBP13.6□□□□□ -0.23
NUP50-216ENST00000486184 APLP1P51693 650 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 FKBP1BP68106 108 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 ZNF589Q86UQ0 364 aaPredicted RBP13.6□□□□□ -0.23
NUP50-216ENST00000486184 CDAN1Q8IWY9 1227 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 IFNL3Q8IZI9 196 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 ZNF341Q9BYN7 854 aa13.6□□□□□ -0.23
NUP50-216ENST00000486184 ABT1Q9ULW3 272 aaKnown RBP13.6□□□□□ -0.23
NUP50-216ENST00000486184 ANGEL1Q9UNK9 670 aaKnown RBP13.6□□□□□ -0.23
NUP50-216ENST00000486184 MINDY4BA8MYZ0 360 aa13.59□□□□□ -0.23
NUP50-216ENST00000486184 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
NUP50-216ENST00000486184 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
NUP50-216ENST00000486184 ESYT1Q9BSJ8 1104 aa13.59□□□□□ -0.23
NUP50-216ENST00000486184 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.59□□□□□ -0.23
NUP50-216ENST00000486184 HERC5Q9UII4 1024 aaKnown RBP13.59□□□□□ -0.23
NUP50-216ENST00000486184 USP17L12C9JPN9 530 aa13.58□□□□□ -0.24
NUP50-216ENST00000486184 USP17L21D6R901 530 aa13.58□□□□□ -0.24
NUP50-216ENST00000486184 SGSM2O43147 1006 aa13.58□□□□□ -0.24
NUP50-216ENST00000486184 SLC3A2P08195 630 aaKnown RBP13.58□□□□□ -0.24
NUP50-216ENST00000486184 HSPD1P10809 573 aaKnown RBP13.58□□□□□ -0.24
NUP50-216ENST00000486184 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
NUP50-216ENST00000486184 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
NUP50-216ENST00000486184 EHD4Q9H223 541 aa13.58□□□□□ -0.24
NUP50-216ENST00000486184 EPB41L4AQ9HCS5 686 aaPredicted RBP13.58□□□□□ -0.24
NUP50-216ENST00000486184 MKRN1Q9UHC7 482 aaKnown RBP13.58□□□□□ -0.24
NUP50-216ENST00000486184 SERPINB13Q9UIV8 391 aa13.58□□□□□ -0.24
NUP50-216ENST00000486184 SBK1Q52WX2 424 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 CST9Q5W186 159 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 CTR9Q6PD62 1173 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 WRNIP1Q96S55 665 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 DSCC1Q9BVC3 393 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 ANO2Q9NQ90 1003 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 CREBZFQ9NS37 354 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.57□□□□□ -0.24
NUP50-216ENST00000486184 CTNNA3Q9UI47 895 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 CSADQ9Y600 493 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 ZMYM6O95789 1325 aa13.57□□□□□ -0.24
NUP50-216ENST00000486184 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 TBC1D12O60347 775 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 EIF5BO60841 1220 aaKnown RBP13.56□□□□□ -0.24
NUP50-216ENST00000486184 CYP2D6P10635 497 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 PLCD1P51178 756 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 HUNKP57058 714 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 ALX1Q15699 326 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 C12orf60Q5U649 245 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
NUP50-216ENST00000486184 ANKRD13AQ8IZ07 590 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 SWAP70Q9UH65 585 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 FZD1Q9UP38 647 aa13.56□□□□□ -0.24
NUP50-216ENST00000486184 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 UBE2Q2LH0YL09 131 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 USP2O75604 605 aaPredicted RBP13.55□□□□□ -0.24
NUP50-216ENST00000486184 REC8O95072 547 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 HSPA6P17066 643 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 PPARAQ07869 468 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 MAP3K11Q16584 847 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 IMMTQ16891 758 aaKnown RBP13.55□□□□□ -0.24
NUP50-216ENST00000486184 MOB2Q70IA6 237 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 KLRG1Q96E93 195 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 IL25Q9H293 177 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 TLL2Q9Y6L7 1015 aa13.55□□□□□ -0.24
NUP50-216ENST00000486184 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 ZNF213O14771 459 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 FGAP02671 866 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 MAP3K9P80192 1104 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 PDE4BQ07343 736 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 SAPCD2Q86UD0 394 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 STK11IPQ8N1F8 1099 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUP50-216ENST00000486184 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 PICK1Q9NRD5 415 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 ROBO3Q96MS0 1386 aa13.54□□□□□ -0.24
NUP50-216ENST00000486184 FOXP2O15409 715 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 CTNND1O60716 968 aaKnown RBP13.53□□□□□ -0.24
NUP50-216ENST00000486184 MAP3K10Q02779 954 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
NUP50-216ENST00000486184 C16orf86Q6ZW13 317 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 DYNLL2Q96FJ2 89 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 TOMM22Q9NS69 142 aa13.53□□□□□ -0.24
NUP50-216ENST00000486184 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
NUP50-216ENST00000486184 SLURP2P0DP57 97 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 INPP5BP32019 993 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 CDK8P49336 464 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 ZNF157P51786 506 aaPredicted RBP13.52□□□□□ -0.25
NUP50-216ENST00000486184 HAND2P61296 217 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 PTH1RQ03431 593 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 GRM1Q13255 1194 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 VGLL4Q14135 290 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 DEFB115Q30KQ5 88 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 RGMBQ6NW40 437 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 METTL16Q86W50 562 aaKnown RBP13.52□□□□□ -0.25
NUP50-216ENST00000486184 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.25
NUP50-216ENST00000486184 ZKSCAN4Q969J2 545 aaPredicted RBP13.52□□□□□ -0.25
NUP50-216ENST00000486184 HHIPL1Q96JK4 782 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms