RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 ADCY9O60503 1353 aa5.51□□□□□ -1.53
SMARCC1-206ENST00000485737 VPS37CA5D8V6 355 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 FAM177BA6PVY3 158 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 SRGAP3O43295 1099 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 ALDH1L1O75891 902 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 F11P03951 625 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 TNNT1P13805 278 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 ZKSCAN1P17029 563 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 RPS6KB1P23443 525 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 PLA2G4AP47712 749 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 GTF2IP78347 998 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 RASSF7Q02833 373 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 PTH1RQ03431 593 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 RESTQ13127 1097 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 DHX8Q14562 1220 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 TAF7Q15545 349 aaPredicted RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 ADCK5Q3MIX3 580 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 WDR44Q5JSH3 913 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 BEND3Q5T5X7 828 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 LARP1BQ659C4 914 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 CREB3L3Q68CJ9 461 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 PRPF40BQ6NWY9 871 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 CWC27Q6UX04 472 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 LUZP1Q86V48 1076 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 NFATC2IPQ8NCF5 419 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 RHBDD1Q8TEB9 315 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 CACTINQ8WUQ7 758 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 ERO1AQ96HE7 468 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 NUCKS1Q9H1E3 243 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 DACT1Q9NYF0 836 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 SPG7Q9UQ90 795 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 HDAC5Q9UQL6 1122 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 RBM8AQ9Y5S9 174 aaKnown RBP5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 TNRQ92752 1358 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 ARHGAP23Q9P227 1491 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 ADAMTS7Q9UKP4 1686 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 CAMTA1Q9Y6Y1 1673 aa5.5□□□□□ -1.53
SMARCC1-206ENST00000485737 UTYO14607 1347 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 NFAT5O94916 1531 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 A0A1B0GTH6 734 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 SLC27A2O14975 620 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 TUBB4AP04350 444 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 SLFN14P0C7P3 912 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CSB-PGBD3P0DP91 1061 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CPA1P15085 419 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 ZNF165P49910 485 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CCZ1BP86790 482 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CCZ1P86791 482 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 LRMPQ12912 555 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 KRT32Q14532 448 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 IQCB1Q15051 598 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 STX1AQ16623 288 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CCDC144BQ3MJ40 725 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 USPL1Q5W0Q7 1092 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CEP135Q66GS9 1140 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 ATL3Q6DD88 541 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CCDC144CPQ8IYA2 1237 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 KRT222Q8N1A0 295 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CLASRPQ8N2M8 674 aaKnown RBP5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 PGBD3Q8N328 593 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 SVOPQ8N4V2 548 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 IL17REQ8NFR9 667 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 DNAAF4Q8WXU2 420 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 GLMNQ92990 594 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 GTF3C6Q969F1 213 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 AIDAQ96BJ3 306 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 GMCL1Q96IK5 515 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 SPATA32Q96LK8 384 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 C16orf45Q96MC5 204 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 TRERF1Q96PN7 1200 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 TRIM5Q9C035 493 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 OSBPL5Q9H0X9 879 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 ZSCAN16Q9H4T2 348 aaPredicted RBP5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 RUBCNLQ9H714 662 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 L2HGDHQ9H9P8 463 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 CLIP2Q9UDT6 1046 aa5.49□□□□□ -1.53
SMARCC1-206ENST00000485737 HEG1Q9ULI3 1381 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 CCDC66A2RUB6 948 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 USP17L3A6NCW0 530 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 USP17L4A6NCW7 530 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 TMEM229AB2RXF0 380 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 LZTS3O60299 673 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 MAP4K4O95819 1239 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 NBPF7P0C2Y1 421 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 HOXC9P31274 260 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 SMTNP53814 917 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 GSDMDP57764 484 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 EIF4A1P60842 406 aaKnown RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 SLC20A2Q08357 652 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 NMIQ13287 307 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 TOB2Q14106 344 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 TERF2Q15554 542 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 TPD52L1Q16890 204 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 NAA16Q6N069 864 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 BLOC1S2Q6QNY1 142 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 USP17L2Q6R6M4 530 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 ZNF771Q7L3S4 317 aaPredicted RBP5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 USP17L1Q7RTZ2 530 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 TICAM2Q86XR7 235 aa5.48□□□□□ -1.53
SMARCC1-206ENST00000485737 LRRC8AQ8IWT6 810 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 1068.6 ms