RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 PPFIA4O75335 1185 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 BCRP11274 1271 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 FANCCQ00597 558 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 GABPB1Q06547 395 aaPredicted RBP12.17□□□□□ -0.46
PATJ-207ENST00000484562 CCDC84Q86UT8 332 aaPredicted RBP12.17□□□□□ -0.46
PATJ-207ENST00000484562 TEX11Q8IYF3 940 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 VPS16Q9H269 839 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 KRT9P35527 623 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 ASIC3Q9UHC3 531 aa12.17□□□□□ -0.46
PATJ-207ENST00000484562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.17□□□□□ -0.46
PATJ-207ENST00000484562 BUB1BO60566 1050 aaPredicted RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 POLD1P28340 1107 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 RASSF2P50749 326 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 EIF4A2Q14240 407 aaKnown RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 PARP10Q53GL7 1025 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 MAP3K21Q5TCX8 1036 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 GTF3C6Q969F1 213 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 HOOK2Q96ED9 719 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 CTTNBP2NLQ9P2B4 639 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 GOLGA6BA6NDN3 693 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 SH3BGRP55822 239 aaPredicted RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 CFAP221Q4G0U5 840 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 ZNF131P52739 623 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 IRX4P78413 519 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 P3H4Q92791 437 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 ZBTB40Q9NUA8 1239 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 NLRP12P59046 1061 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 CABS1Q96KC9 395 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 CACYBPQ9HB71 228 aaKnown RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 ANGEL1Q9UNK9 670 aaKnown RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 VAMP4O75379 141 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 MAGEA1P43355 309 aa12.16□□□□□ -0.46
PATJ-207ENST00000484562 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
PATJ-207ENST00000484562 CLGNO14967 610 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 SATB1Q01826 763 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 CCDC38Q502W7 563 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 TTC38Q5R3I4 469 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 ATP2A3Q93084 1043 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 NONOQ15233 471 aaKnown RBP eCLIP12.15□□□□□ -0.46
PATJ-207ENST00000484562 PPP2R5EQ16537 467 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 SEPT14Q6ZU15 432 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 CUL7Q14999 1698 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.463e-7■■□□□ 11.5
PATJ-207ENST00000484562 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
PATJ-207ENST00000484562 DCUN1D2Q6PH85 259 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 PIK3AP1Q6ZUJ8 805 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 CCDC51Q96ER9 411 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 RAB17Q9H0T7 212 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 VCX3AQ9NNX9 186 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 WDR7Q9Y4E6 1490 aa12.15□□□□□ -0.46
PATJ-207ENST00000484562 CCNT1O60563 726 aaKnown RBP12.15□□□□□ -0.47
PATJ-207ENST00000484562 GNA14O95837 355 aa12.15□□□□□ -0.47
PATJ-207ENST00000484562 PUM3Q15397 648 aaKnown RBP12.15□□□□□ -0.47
PATJ-207ENST00000484562 HMGXB3Q12766 1538 aa12.15□□□□□ -0.47
PATJ-207ENST00000484562 EYA2O00167 538 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 CEP104O60308 925 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 HARSP12081 509 aaKnown RBP12.14□□□□□ -0.47
PATJ-207ENST00000484562 ZNF75DP51815 510 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 SP4Q02446 784 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 RPS6KA1Q15418 735 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 RBM26Q5T8P6 1007 aaKnown RBP12.14□□□□□ -0.47
PATJ-207ENST00000484562 APPBP2Q92624 585 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 PCDH11XQ9BZA7 1347 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 PCDH11YQ9BZA8 1340 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 ZNF853P0CG23 659 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 RXRAP19793 462 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
PATJ-207ENST00000484562 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 ANKRD20A3Q5VUR7 823 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 GBP7Q8N8V2 638 aaPredicted RBP12.14□□□□□ -0.47
PATJ-207ENST00000484562 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 BICC1Q9H694 974 aaKnown RBP12.14□□□□□ -0.47
PATJ-207ENST00000484562 LRWD1Q9UFC0 647 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 RNF40O75150 1001 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 ADCY7P51828 1080 aa12.14□□□□□ -0.47
PATJ-207ENST00000484562 CLNS1AP54105 237 aaKnown RBP12.14□□□□□ -0.47
PATJ-207ENST00000484562 CUL4BQ13620 913 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 CWF19L2Q2TBE0 894 aaKnown RBP12.13□□□□□ -0.47
PATJ-207ENST00000484562 DIS3L2Q8IYB7 885 aaKnown RBP12.13□□□□□ -0.47
PATJ-207ENST00000484562 PPP1R12CQ9BZL4 782 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 SLC27A2O14975 620 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 HOXB7P09629 217 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 KLHL30Q0D2K2 578 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 SFMBT2Q5VUG0 894 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 HELBQ8NG08 1087 aaPredicted RBP12.13□□□□□ -0.47
PATJ-207ENST00000484562 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 CARD6Q9BX69 1037 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 GPCPD1Q9NPB8 672 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 B4E1Z4 1266 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 P4HA1P13674 534 aa12.13□□□□□ -0.47
PATJ-207ENST00000484562 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
PATJ-207ENST00000484562 GSDMBQ8TAX9 411 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms