RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PTPRFP10586 1907 aa15.68■□□□□ 0.1
HDAC1-209ENST00000484305 PDE6AP16499 860 aa15.67■□□□□ 0.1
HDAC1-209ENST00000484305 MOGSQ13724 837 aa15.67■□□□□ 0.1
HDAC1-209ENST00000484305 TAF1CQ15572 869 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-209ENST00000484305 SLC9C2Q5TAH2 1124 aa15.67■□□□□ 0.1
HDAC1-209ENST00000484305 TMED8Q6PL24 325 aaPredicted RBP15.67■□□□□ 0.1
HDAC1-209ENST00000484305 DHX36Q9H2U1 1008 aaKnown RBP15.67■□□□□ 0.1
HDAC1-209ENST00000484305 PAG1Q9NWQ8 432 aa15.67■□□□□ 0.1
HDAC1-209ENST00000484305 SAP30BPQ9UHR5 308 aaKnown RBP15.67■□□□□ 0.1
HDAC1-209ENST00000484305 ZHX2Q9Y6X8 837 aa15.67■□□□□ 0.1
HDAC1-209ENST00000484305 MYH7P12883 1935 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 RRP1BQ14684 758 aaKnown RBP15.66■□□□□ 0.1
HDAC1-209ENST00000484305 CCDC84Q86UT8 332 aaPredicted RBP15.66■□□□□ 0.1
HDAC1-209ENST00000484305 HAUS7Q99871 368 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 PI4KBQ9UBF8 816 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 AFG3L2Q9Y4W6 797 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 ZNF532Q9HCE3 1301 aa15.66■□□□□ 0.1
HDAC1-209ENST00000484305 TCRBV5S4A2TA0A5A2 114 aa15.65■□□□□ 0.1
HDAC1-209ENST00000484305 SLC4A8Q2Y0W8 1093 aa15.65■□□□□ 0.1
HDAC1-209ENST00000484305 CERS3Q8IU89 383 aa15.65■□□□□ 0.1
HDAC1-209ENST00000484305 RIOK1Q9BRS2 568 aaKnown RBP15.65■□□□□ 0.1
HDAC1-209ENST00000484305 DNAJC18Q9H819 358 aa15.65■□□□□ 0.1
HDAC1-209ENST00000484305 ZCCHC17Q9NP64 241 aaKnown RBP15.65■□□□□ 0.1
HDAC1-209ENST00000484305 HERC5Q9UII4 1024 aaKnown RBP15.65■□□□□ 0.1
HDAC1-209ENST00000484305 MAGEB6P1A0A0J9YX57 407 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 CXCL11O14625 94 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 CAP2P40123 477 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 USP5P45974 858 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 SP3Q02447 781 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 SLFNL1Q499Z3 407 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 ANKRD23Q86SG2 305 aa15.64■□□□□ 0.09
HDAC1-209ENST00000484305 METTL16Q86W50 562 aaKnown RBP15.64■□□□□ 0.09
HDAC1-209ENST00000484305 FOXP4Q8IVH2 680 aaPredicted RBP15.64■□□□□ 0.09
HDAC1-209ENST00000484305 A0A0G2JLL6 359 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-209ENST00000484305 PDHXO00330 501 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 CAP1Q01518 475 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 PKN2Q16513 984 aaKnown RBP15.63■□□□□ 0.09
HDAC1-209ENST00000484305 TSHZ3Q63HK5 1081 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 GPAT2Q6NUI2 795 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 PRRT2Q7Z6L0 340 aaPredicted RBP15.63■□□□□ 0.09
HDAC1-209ENST00000484305 CD99L2Q8TCZ2 262 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 ECHDC1Q9NTX5 307 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 NAV1Q8NEY1 1877 aa15.63■□□□□ 0.09
HDAC1-209ENST00000484305 DDX60LQ5H9U9 1706 aaKnown RBP15.63■□□□□ 0.09
HDAC1-209ENST00000484305 TRIM75PA6NK02 468 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 TLR2O60603 784 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 CHGBP05060 677 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 HLA-DOAP06340 250 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 ADD2P35612 726 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 JAG1P78504 1218 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 OTOP1Q7RTM1 612 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 LCORLQ8N3X6 602 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 CRACR2BQ8N4Y2 399 aaPredicted RBP15.62■□□□□ 0.09
HDAC1-209ENST00000484305 ERO1AQ96HE7 468 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 TRIM17Q9Y577 477 aa15.62■□□□□ 0.09
HDAC1-209ENST00000484305 ZSWIM8A7E2V4 1837 aa15.61■□□□□ 0.09
HDAC1-209ENST00000484305 GADL1Q6ZQY3 521 aa15.61■□□□□ 0.09
HDAC1-209ENST00000484305 TRIM34Q9BYJ4 488 aa15.61■□□□□ 0.09
HDAC1-209ENST00000484305 CRNKL1Q9BZJ0 848 aaKnown RBP15.61■□□□□ 0.09
HDAC1-209ENST00000484305 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.61■□□□□ 0.092e-7■■■■■ 40.9
HDAC1-209ENST00000484305 HPS5Q9UPZ3 1129 aa15.61■□□□□ 0.09
HDAC1-209ENST00000484305 SPP2Q13103 211 aa15.6■□□□□ 0.09
HDAC1-209ENST00000484305 SHROOM1Q2M3G4 852 aaPredicted RBP15.6■□□□□ 0.09
HDAC1-209ENST00000484305 FBXO46Q6PJ61 603 aaPredicted RBP15.6■□□□□ 0.09
HDAC1-209ENST00000484305 FASTKD5Q7L8L6 764 aaKnown RBP15.6■□□□□ 0.09
HDAC1-209ENST00000484305 OTUD7AQ8TE49 926 aaPredicted RBP15.6■□□□□ 0.09
HDAC1-209ENST00000484305 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
HDAC1-209ENST00000484305 ARMT1Q9H993 441 aa15.6■□□□□ 0.09
HDAC1-209ENST00000484305 BAZ2AQ9UIF9 1905 aaKnown RBP15.6■□□□□ 0.09
HDAC1-209ENST00000484305 USP17L5A8MUK1 530 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 GDF11O95390 407 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 CYP2C8P10632 490 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 PLCD1P51178 756 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 EVX2Q03828 476 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 UBE3CQ15386 1083 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 C17orf99Q6UX52 265 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 ZNF280CQ8ND82 737 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 SDR42E1Q8WUS8 393 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 EHD4Q9H223 541 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 EFCC1Q9HA90 598 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 CPA4Q9UI42 421 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 ADGRA2Q96PE1 1338 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 LOC285556D6RIA3 1793 aa15.59■□□□□ 0.09
HDAC1-209ENST00000484305 PRKAB2O43741 272 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 MBD4O95243 580 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 ASNSP08243 561 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 HDAC1Q13547 482 aaPredicted RBP15.58■□□□□ 0.08
HDAC1-209ENST00000484305 ZSCAN25Q6NSZ9 544 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 TATDN1Q6P1N9 297 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 TTC6Q86TZ1 520 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 TBC1D2Q9BYX2 928 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 ARHGAP39Q9C0H5 1083 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 DCP1AQ9NPI6 582 aaPredicted RBP15.58■□□□□ 0.08
HDAC1-209ENST00000484305 MCM9Q9NXL9 1143 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 SERPINB13Q9UIV8 391 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 PTPN22Q9Y2R2 807 aa15.58■□□□□ 0.08
HDAC1-209ENST00000484305 POLR3DP05423 398 aaPredicted RBP15.57■□□□□ 0.08
HDAC1-209ENST00000484305 HMGCS2P54868 508 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms