RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 FMNL1O95466 1100 aaPredicted RBP11.52□□□□□ -0.57
NUP50-215ENST00000484186 BCRP11274 1271 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 CYP7A1P22680 504 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
NUP50-215ENST00000484186 AACSQ86V21 672 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 FOXP4Q8IVH2 680 aaPredicted RBP11.52□□□□□ -0.57
NUP50-215ENST00000484186 MAPKAPK5Q8IW41 473 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 RPAP2Q8IXW5 612 aaPredicted RBP11.52□□□□□ -0.57
NUP50-215ENST00000484186 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.57
NUP50-215ENST00000484186 SRRDQ9UH36 339 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 DDX19BQ9UMR2 479 aa11.52□□□□□ -0.57
NUP50-215ENST00000484186 USP17L5A8MUK1 530 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
NUP50-215ENST00000484186 EN2P19622 333 aaPredicted RBP11.51□□□□□ -0.57
NUP50-215ENST00000484186 OSBPP22059 807 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
NUP50-215ENST00000484186 SPP2Q13103 211 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 RRP1BQ14684 758 aaKnown RBP11.51□□□□□ -0.57
NUP50-215ENST00000484186 RHPN1Q8TCX5 695 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 ZBTB40Q9NUA8 1239 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
NUP50-215ENST00000484186 HMMRO75330 724 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 MAP3K12Q12852 859 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 PRPF38BQ5VTL8 546 aaKnown RBP11.5□□□□□ -0.57
NUP50-215ENST00000484186 TMED8Q6PL24 325 aaPredicted RBP11.5□□□□□ -0.57
NUP50-215ENST00000484186 METTL16Q86W50 562 aaKnown RBP11.5□□□□□ -0.57
NUP50-215ENST00000484186 CERS3Q8IU89 383 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
NUP50-215ENST00000484186 ZNF280CQ8ND82 737 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
NUP50-215ENST00000484186 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 IL1RAPL2Q9NP60 686 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 RCAN3Q9UKA8 241 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 PALD1Q9ULE6 856 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 NDUFB9Q9Y6M9 179 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 FLT1P17948 1338 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
NUP50-215ENST00000484186 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
NUP50-215ENST00000484186 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 ZSWIM8A7E2V4 1837 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 MYCP01106 439 aaPredicted RBP11.49□□□□□ -0.57
NUP50-215ENST00000484186 FCGRTP55899 365 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 TREML2Q5T2D2 321 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 SIRT2Q8IXJ6 389 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 CLASRPQ8N2M8 674 aaKnown RBP11.49□□□□□ -0.57
NUP50-215ENST00000484186 CRACR2BQ8N4Y2 399 aaPredicted RBP11.49□□□□□ -0.57
NUP50-215ENST00000484186 MAGEB6Q8N7X4 407 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
NUP50-215ENST00000484186 KIF1BPQ96EK5 621 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
NUP50-215ENST00000484186 RAB11FIP3O75154 756 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 HLA-DOAP06340 250 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 ASNSP08243 561 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 GRK4P32298 578 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 USP5P45974 858 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 HMGCS2P54868 508 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP50-215ENST00000484186 TTF1Q15361 905 aaPredicted RBP11.48□□□□□ -0.57
NUP50-215ENST00000484186 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 WDR18Q9BV38 432 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 SAP30BPQ9UHR5 308 aaKnown RBP11.48□□□□□ -0.57
NUP50-215ENST00000484186 MAST2Q6P0Q8 1798 aa11.48□□□□□ -0.57
NUP50-215ENST00000484186 HTTP42858 3142 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 KIAA0100Q14667 2235 aaKnown RBP11.47□□□□□ -0.57
NUP50-215ENST00000484186 MYO5AQ9Y4I1 1855 aaKnown RBP11.47□□□□□ -0.57
NUP50-215ENST00000484186 APBB1O00213 710 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 IFIT2P09913 472 aaKnown RBP11.47□□□□□ -0.57
NUP50-215ENST00000484186 BACE1P56817 501 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 JAG1P78504 1218 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 PRKCZQ05513 592 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 ANKRD13CQ8N6S4 541 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
NUP50-215ENST00000484186 GABRQQ9UN88 632 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 PTPRFP10586 1907 aa11.47□□□□□ -0.57
NUP50-215ENST00000484186 RBBP6Q7Z6E9 1792 aaKnown RBP11.46□□□□□ -0.57
NUP50-215ENST00000484186 C19orf81C9J6K1 198 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
NUP50-215ENST00000484186 GDF11O95390 407 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 GCLCP48506 637 aaPredicted RBP11.46□□□□□ -0.57
NUP50-215ENST00000484186 UBXN2AP68543 259 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 MTFR1Q15390 333 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 ASCC2Q9H1I8 757 aaPredicted RBP11.46□□□□□ -0.57
NUP50-215ENST00000484186 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
NUP50-215ENST00000484186 BIN2Q9UBW5 565 aaPredicted RBP11.46□□□□□ -0.57
NUP50-215ENST00000484186 SIPA1L1O43166 1804 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms