RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 DLGAP5Q15398 846 aa8.74□□□□□ -1.01
CHD6-209ENST00000482596 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
CHD6-209ENST00000482596 ATP11BQ9Y2G3 1177 aa8.74□□□□□ -1.01
CHD6-209ENST00000482596 PLXNB2O15031 1838 aa8.74□□□□□ -1.01
CHD6-209ENST00000482596 MYO3BQ8WXR4 1341 aa8.74□□□□□ -1.01
CHD6-209ENST00000482596 TRIM43BA6NCK2 446 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
CHD6-209ENST00000482596 PTPREP23469 700 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 TCF15Q12870 199 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 PPIL2Q13356 520 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 PDIA6Q15084 440 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 ERO1BQ86YB8 467 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 ZKSCAN4Q969J2 545 aaPredicted RBP8.73□□□□□ -1.01
CHD6-209ENST00000482596 TRIM43Q96BQ3 446 aaPredicted RBP8.73□□□□□ -1.01
CHD6-209ENST00000482596 TEPSINQ96N21 525 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 ADAM33Q9BZ11 813 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 ARAP2Q8WZ64 1704 aa8.73□□□□□ -1.01
CHD6-209ENST00000482596 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 CACNA1HO95180 2353 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 MAST4O15021 2626 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 SOWAHBA6NEL2 793 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 GNAT3A8MTJ3 354 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 PTPN5P54829 565 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 STRIP1Q5VSL9 837 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 TYW1BQ6NUM6 668 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 ADGRD1Q6QNK2 874 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 NLRP10Q86W26 655 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 TRIB2Q92519 343 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 PRMT6Q96LA8 375 aaPredicted RBP8.72□□□□□ -1.01
CHD6-209ENST00000482596 SIN3AQ96ST3 1273 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 PDLIM7Q9NR12 457 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 IGSF5Q9NSI5 407 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 TRMT112Q9UI30 125 aaKnown RBP8.72□□□□□ -1.01
CHD6-209ENST00000482596 VPS13AQ96RL7 3174 aa8.72□□□□□ -1.01
CHD6-209ENST00000482596 TK2O00142 265 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 RPS8P62241 208 aaKnown RBP8.71□□□□□ -1.02
CHD6-209ENST00000482596 MAP3K21Q5TCX8 1036 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 GPAT2Q6NUI2 795 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 CCDC129Q6ZRS4 1044 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 DDX12PQ92771 950 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 COA7Q96BR5 231 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 PARK7Q99497 189 aaKnown RBP8.71□□□□□ -1.02
CHD6-209ENST00000482596 EPAS1Q99814 870 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 DACH1Q9UI36 760 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 SH3TC1Q8TE82 1336 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 GVINP1Q7Z2Y8 2422 aa8.71□□□□□ -1.02
CHD6-209ENST00000482596 ALADP13716 330 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 CCND3P30281 292 aaPredicted RBP8.7□□□□□ -1.02
CHD6-209ENST00000482596 CFAP100Q494V2 611 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 ASCL5Q7RTU5 278 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 GJD3Q8N144 294 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 HERVK_113Q902F9 699 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 TMEM39BQ9GZU3 492 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 SEC31BQ9NQW1 1179 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 BSDC1Q9NW68 430 aaPredicted RBP8.7□□□□□ -1.02
CHD6-209ENST00000482596 KCNH4Q9UQ05 1017 aa8.7□□□□□ -1.02
CHD6-209ENST00000482596 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
CHD6-209ENST00000482596 FAM208BQ5VWN6 2430 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 MMP14P50281 582 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 SF3B3Q15393 1217 aaKnown RBP8.69□□□□□ -1.02
CHD6-209ENST00000482596 TTLL5Q6EMB2 1281 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 CERS5Q8N5B7 392 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 RNF166Q96A37 237 aaPredicted RBP8.69□□□□□ -1.02
CHD6-209ENST00000482596 WRNIP1Q96S55 665 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 NKX2-4Q9H2Z4 354 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 GJD2Q9UKL4 321 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 COG5Q9UP83 839 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 DAGLAQ9Y4D2 1042 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 ATRNL1Q5VV63 1379 aa8.69□□□□□ -1.02
CHD6-209ENST00000482596 F8W031 263 aaPredicted RBP8.68□□□□□ -1.02
CHD6-209ENST00000482596 MYO1BO43795 1136 aa8.68□□□□□ -1.02
CHD6-209ENST00000482596 CACNB2Q08289 660 aaPredicted RBP8.68□□□□□ -1.02
CHD6-209ENST00000482596 TRIM60Q495X7 471 aa8.68□□□□□ -1.02
CHD6-209ENST00000482596 KRT40Q6A162 431 aa8.68□□□□□ -1.02
CHD6-209ENST00000482596 TXNRD3Q86VQ6 643 aa8.68□□□□□ -1.02
CHD6-209ENST00000482596 FAM178BQ8IXR5 827 aa8.68□□□□□ -1.02
CHD6-209ENST00000482596 THUMPD2Q9BTF0 503 aaKnown RBP8.68□□□□□ -1.02
CHD6-209ENST00000482596 RFXAPO00287 272 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 DCXO43602 365 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 SSTR3P32745 418 aaPredicted RBP8.67□□□□□ -1.02
CHD6-209ENST00000482596 GTF2IP78347 998 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 PPATQ06203 517 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 ST3GAL2Q16842 350 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 KMT2EQ8IZD2 1858 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 MFSD14AQ96MC6 490 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 ALG13Q9NP73 1137 aaKnown RBP8.67□□□□□ -1.02
CHD6-209ENST00000482596 MED23Q9ULK4 1368 aa8.67□□□□□ -1.02
CHD6-209ENST00000482596 TECTAO75443 2155 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 XDHP47989 1333 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 NEUROD1Q13562 356 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 RTL5Q5HYW3 569 aaPredicted RBP8.66□□□□□ -1.02
CHD6-209ENST00000482596 SLC39A5Q6ZMH5 540 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 HLA-CQ95604 372 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 FAM89AQ96GI7 184 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.66□□□□□ -1.026e-14■■□□□ 13.2
CHD6-209ENST00000482596 SLC4A5Q9BY07 1137 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 VPS9D1Q9Y2B5 631 aa8.66□□□□□ -1.02
CHD6-209ENST00000482596 YBX2Q9Y2T7 364 aaKnown RBP8.66□□□□□ -1.02
CHD6-209ENST00000482596 MTCH2Q9Y6C9 303 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms