RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 RBAK-RBAKDNI3L0D1 243 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 RAD51AP2Q09MP3 1159 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 NFIAQ12857 509 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 FAM196AQ6ZSG2 479 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 NT5DC4Q86YG4 428 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 EAF1Q96JC9 268 aaPredicted RBP6.6□□□□□ -1.35
CCNL1-220ENST00000478454 MFSD14AQ96MC6 490 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 PSMG3-AS1Q96PY0 264 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 WNT10AQ9GZT5 417 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 IGSF5Q9NSI5 407 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 UBP1Q9NZI7 540 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
CCNL1-220ENST00000478454 CORINQ9Y5Q5 1042 aa6.6□□□□□ -1.35
CCNL1-220ENST00000478454 FANCGO15287 622 aa6.59□□□□□ -1.35
CCNL1-220ENST00000478454 TLR3O15455 904 aaKnown RBP6.59□□□□□ -1.35
CCNL1-220ENST00000478454 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
CCNL1-220ENST00000478454 GRK4P32298 578 aa6.59□□□□□ -1.35
CCNL1-220ENST00000478454 HNRNPUQ00839 825 aaKnown RBP eCLIP6.59□□□□□ -1.35
CCNL1-220ENST00000478454 CDK5R2Q13319 367 aa6.59□□□□□ -1.35
CCNL1-220ENST00000478454 NKG7Q16617 165 aa6.59□□□□□ -1.35
CCNL1-220ENST00000478454 F13BP05160 661 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 MAP7Q14244 749 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 PAOXQ6QHF9 649 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
CCNL1-220ENST00000478454 FBXL6Q8N531 539 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 SPON2Q9BUD6 331 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 YIPF2Q9BWQ6 316 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 PICK1Q9NRD5 415 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 PCOLCE2Q9UKZ9 415 aa6.58□□□□□ -1.36
CCNL1-220ENST00000478454 SUPT16HQ9Y5B9 1047 aaKnown RBP6.58□□□□□ -1.36
CCNL1-220ENST00000478454 FAM170BA6NMN3 283 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 GRIN3BO60391 1043 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 TCF3P15923 654 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 SLBPQ14493 270 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCNL1-220ENST00000478454 REC114Q7Z4M0 266 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 ZAR1Q86SH2 424 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 ZDHHC13Q8IUH4 622 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 SHKBP1Q8TBC3 707 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 TBC1D32Q96NH3 1257 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 DBNDD2Q9BQY9 259 aa6.57□□□□□ -1.36
CCNL1-220ENST00000478454 PRR19A6NJB7 356 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 E9PSI1 815 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 LEFTY1O75610 366 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
CCNL1-220ENST00000478454 MPP2Q14168 576 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 KIAA0825Q8IV33 1275 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 ZNF507Q8TCN5 953 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 NT5C1AQ9BXI3 368 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 LRRC3Q9BY71 257 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 BRMS1Q9HCU9 246 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 SSU72Q9NP77 194 aaKnown RBP6.56□□□□□ -1.36
CCNL1-220ENST00000478454 TJP2Q9UDY2 1190 aa6.56□□□□□ -1.36
CCNL1-220ENST00000478454 PRR36Q9H6K5 1346 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 WDR64B1ANS9 1081 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 DNAJA2O60884 412 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 BPNT1O95861 308 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 SEZ6Q53EL9 994 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 ZNF765Q7L2R6 523 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 ACSF2Q96CM8 615 aaPredicted RBP6.55□□□□□ -1.36
CCNL1-220ENST00000478454 ACBD3Q9H3P7 528 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.55□□□□□ -1.36
CCNL1-220ENST00000478454 TACC3Q9Y6A5 838 aa6.55□□□□□ -1.36
CCNL1-220ENST00000478454 HTR3BO95264 441 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 TGFB1P01137 390 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 PGRP06401 933 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 FAM87AP0C7U9 286 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 TNNI2P48788 182 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 APOBRQ0VD83 1088 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 CDC37L1Q7L3B6 337 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 HID1Q8IV36 788 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 SLITRK4Q8IW52 837 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 ZNF654Q8IZM8 581 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 DPH2Q9BQC3 489 aaPredicted RBP6.54□□□□□ -1.36
CCNL1-220ENST00000478454 DUSP23Q9BVJ7 150 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 U3KQE9 123 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 ROBO2Q9HCK4 1378 aa6.54□□□□□ -1.36
CCNL1-220ENST00000478454 CNTNAP4Q9C0A0 1308 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 UPK3BL1B0FP48 263 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 UPK3BL2E5RIL1 263 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 GSC2O15499 205 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 MED26O95402 600 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 PLCG1P19174 1290 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 CAP2P40123 477 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 CLCQ05315 142 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 PAK2Q13177 524 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 CWF19L2Q2TBE0 894 aaKnown RBP6.53□□□□□ -1.36
CCNL1-220ENST00000478454 PRAMEF13Q5VWM6 474 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 OGFOD3Q6PK18 319 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 SLC51AQ86UW1 340 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 RIN3Q8TB24 985 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 TMEM87BQ96K49 555 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 REV1Q9UBZ9 1251 aa6.53□□□□□ -1.36
CCNL1-220ENST00000478454 LRIG2O94898 1065 aa6.52□□□□□ -1.37
CCNL1-220ENST00000478454 HOXA10P31260 410 aaPredicted RBP6.52□□□□□ -1.37
CCNL1-220ENST00000478454 TMEM201Q5SNT2 666 aa6.52□□□□□ -1.37
CCNL1-220ENST00000478454 FAM214BQ7L5A3 538 aa6.52□□□□□ -1.37
CCNL1-220ENST00000478454 MCATQ8IVS2 390 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms