RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZHX2Q9Y6X8 837 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 FLT1P17948 1338 aa10.05□□□□□ -0.8
HDAC6-221ENST00000477561 MAST2Q6P0Q8 1798 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 FKTNO75072 461 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 CHGBP05060 677 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 CETPP11597 493 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 PDE6AP16499 860 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 USP5P45974 858 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 RRP1BQ14684 758 aaKnown RBP10.04□□□□□ -0.8
HDAC6-221ENST00000477561 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-221ENST00000477561 CTU1Q7Z7A3 348 aaKnown RBP10.04□□□□□ -0.8
HDAC6-221ENST00000477561 SCYL3Q8IZE3 742 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 CFHR5Q9BXR6 569 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 DOCK2Q92608 1830 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 ZNF532Q9HCE3 1301 aa10.04□□□□□ -0.8
HDAC6-221ENST00000477561 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 TBC1D12O60347 775 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 CTNND1O60716 968 aaKnown RBP10.03□□□□□ -0.8
HDAC6-221ENST00000477561 IGSF3O75054 1194 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 PTPRAP18433 802 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 HAUS7Q99871 368 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 ZFYVE28Q9HCC9 887 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 ECHDC1Q9NTX5 307 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 KCNH4Q9UQ05 1017 aa10.03□□□□□ -0.8
HDAC6-221ENST00000477561 TCRBV5S4A2TA0A5A2 114 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 TRIM75PA6NK02 468 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 ECM2O94769 699 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-221ENST00000477561 AAMPQ13685 434 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-221ENST00000477561 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-221ENST00000477561 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 CD99L2Q8TCZ2 262 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 OTUD7AQ8TE49 926 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-221ENST00000477561 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
HDAC6-221ENST00000477561 TRIM34Q9BYJ4 488 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 DHX36Q9H2U1 1008 aaKnown RBP10.02□□□□□ -0.81
HDAC6-221ENST00000477561 ARMT1Q9H993 441 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 AFG3L2Q9Y4W6 797 aa10.02□□□□□ -0.81
HDAC6-221ENST00000477561 PDHXO00330 501 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 CXCL11O14625 94 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 GDF11O95390 407 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 HLA-DOAP06340 250 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 ADD2P35612 726 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 CAP2P40123 477 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 JAG1P78504 1218 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 CAP1Q01518 475 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 SP3Q02447 781 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 MOGSQ13724 837 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 NOM1Q5C9Z4 860 aaKnown RBP10.01□□□□□ -0.81
HDAC6-221ENST00000477561 GADL1Q6ZQY3 521 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 FOXP4Q8IVH2 680 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-221ENST00000477561 LCORLQ8N3X6 602 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 SDR42E1Q8WUS8 393 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 GPATCH3Q96I76 525 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 DNAJC18Q9H819 358 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 HERC5Q9UII4 1024 aaKnown RBP10.01□□□□□ -0.81
HDAC6-221ENST00000477561 TRIM17Q9Y577 477 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 COL2A1P02458 1487 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-221ENST00000477561 LAMB1P07942 1786 aa10.01□□□□□ -0.81
HDAC6-221ENST00000477561 A0A0G2JLL6 359 aaPredicted RBP10□□□□□ -0.81
HDAC6-221ENST00000477561 PRKAB2O43741 272 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 MBD4O95243 580 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
HDAC6-221ENST00000477561 PLCD1P51178 756 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 EVX2Q03828 476 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 SPP2Q13103 211 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 ANKRD45Q5TZF3 282 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 GPAT2Q6NUI2 795 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 PRRT2Q7Z6L0 340 aaPredicted RBP10□□□□□ -0.81
HDAC6-221ENST00000477561 ANKRD23Q86SG2 305 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 CERS3Q8IU89 383 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 CCDC136Q96JN2 1154 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 CRNKL1Q9BZJ0 848 aaKnown RBP10□□□□□ -0.81
HDAC6-221ENST00000477561 DDX24Q9GZR7 859 aaKnown RBP eCLIP10□□□□□ -0.816e-8■■■■□ 24.3
HDAC6-221ENST00000477561 CPA4Q9UI42 421 aa10□□□□□ -0.81
HDAC6-221ENST00000477561 SIPA1L1O43166 1804 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 USP17L5A8MUK1 530 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 TLR2O60603 784 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 CYP2C8P10632 490 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 CYP2D6P10635 497 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 TMED8Q6PL24 325 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-221ENST00000477561 FASTKD5Q7L8L6 764 aaKnown RBP9.99□□□□□ -0.81
HDAC6-221ENST00000477561 OTOP1Q7RTM1 612 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 METTL16Q86W50 562 aaKnown RBP9.99□□□□□ -0.81
HDAC6-221ENST00000477561 ERO1AQ96HE7 468 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 MCM9Q9NXL9 1143 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 ZBTB47Q9UFB7 747 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-221ENST00000477561 HPS5Q9UPZ3 1129 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 CDK5RAP2Q96SN8 1893 aa9.99□□□□□ -0.81
HDAC6-221ENST00000477561 DOCK1Q14185 1865 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 HDAC1Q13547 482 aaPredicted RBP9.98□□□□□ -0.81
HDAC6-221ENST00000477561 UBE3CQ15386 1083 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 PKN2Q16513 984 aaKnown RBP9.98□□□□□ -0.81
HDAC6-221ENST00000477561 TREML2Q5T2D2 321 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 B4GALNT3Q6L9W6 998 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 ZSCAN25Q6NSZ9 544 aa9.98□□□□□ -0.81
HDAC6-221ENST00000477561 FBXO46Q6PJ61 603 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms