RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
SRRT-210ENST00000477529 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.323e-6■□□□□ 9
SRRT-210ENST00000477529 A0A0G2JMZ2 1700 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 TBC1D12O60347 775 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 TRPA1O75762 1119 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 IGHDP01880 384 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 ERO1BQ86YB8 467 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 MS4A4AQ96JQ5 239 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 KIAA0100Q14667 2235 aaKnown RBP17.05■□□□□ 0.32
SRRT-210ENST00000477529 PLXNA1Q9UIW2 1896 aa17.05■□□□□ 0.32
SRRT-210ENST00000477529 IGF2BP3O00425 579 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRRT-210ENST00000477529 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
SRRT-210ENST00000477529 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
SRRT-210ENST00000477529 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
SRRT-210ENST00000477529 TESPA1A2RU30 521 aaPredicted RBP17.03■□□□□ 0.32
SRRT-210ENST00000477529 IRF6O14896 467 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 ERC2O15083 957 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 USP5P45974 858 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 PPIL2Q13356 520 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 SCYL3Q8IZE3 742 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 KBTBD3Q8NAB2 608 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 DNAJC18Q9H819 358 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 SAP30BPQ9UHR5 308 aaKnown RBP17.03■□□□□ 0.32
SRRT-210ENST00000477529 PALD1Q9ULE6 856 aa17.03■□□□□ 0.32
SRRT-210ENST00000477529 GLRX3O76003 335 aaKnown RBP17.02■□□□□ 0.32
SRRT-210ENST00000477529 MBD4O95243 580 aa17.02■□□□□ 0.32
SRRT-210ENST00000477529 PPATQ06203 517 aa17.02■□□□□ 0.32
SRRT-210ENST00000477529 UBE3CQ15386 1083 aa17.02■□□□□ 0.32
SRRT-210ENST00000477529 SLC4A8Q2Y0W8 1093 aa17.02■□□□□ 0.32
SRRT-210ENST00000477529 METTL16Q86W50 562 aaKnown RBP17.02■□□□□ 0.32
SRRT-210ENST00000477529 PTPN18Q99952 460 aa17.02■□□□□ 0.32
SRRT-210ENST00000477529 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
SRRT-210ENST00000477529 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.02■□□□□ 0.32
SRRT-210ENST00000477529 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.02■□□□□ 0.32
SRRT-210ENST00000477529 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
SRRT-210ENST00000477529 HERC5Q9UII4 1024 aaKnown RBP17.02■□□□□ 0.32
SRRT-210ENST00000477529 CTNND1O60716 968 aaKnown RBP17.01■□□□□ 0.31
SRRT-210ENST00000477529 GTF2A2P52657 109 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 PDE1AP54750 535 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 INHBEP58166 350 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 RRP1BQ14684 758 aaKnown RBP17.01■□□□□ 0.31
SRRT-210ENST00000477529 B4GALNT3Q6L9W6 998 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 BRI3BPQ8WY22 251 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 CRNKL1Q9BZJ0 848 aaKnown RBP17.01■□□□□ 0.31
SRRT-210ENST00000477529 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 SMCHD1A6NHR9 2005 aa17.01■□□□□ 0.31
SRRT-210ENST00000477529 FRMPD3Q5JV73 1810 aa17■□□□□ 0.31
SRRT-210ENST00000477529 CCL15-CCL14A0A0B4J2E2 113 aa17■□□□□ 0.31
SRRT-210ENST00000477529 CCL15Q16663 113 aa17■□□□□ 0.31
SRRT-210ENST00000477529 ZSCAN25Q6NSZ9 544 aa17■□□□□ 0.31
SRRT-210ENST00000477529 STAP2Q9UGK3 403 aa17■□□□□ 0.31
SRRT-210ENST00000477529 KCNH4Q9UQ05 1017 aa17■□□□□ 0.31
SRRT-210ENST00000477529 ALDH1A1P00352 501 aa16.99■□□□□ 0.31
SRRT-210ENST00000477529 HLA-DOAP06340 250 aa16.99■□□□□ 0.31
SRRT-210ENST00000477529 PTPRAP18433 802 aa16.99■□□□□ 0.31
SRRT-210ENST00000477529 NUCB1Q02818 461 aa16.99■□□□□ 0.31
SRRT-210ENST00000477529 PUS7LQ9H0K6 701 aaKnown RBP16.99■□□□□ 0.31
SRRT-210ENST00000477529 R3HDMLQ9H3Y0 253 aa16.99■□□□□ 0.31
SRRT-210ENST00000477529 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
SRRT-210ENST00000477529 PICK1Q9NRD5 415 aa16.99■□□□□ 0.31
SRRT-210ENST00000477529 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
SRRT-210ENST00000477529 CAP2P40123 477 aa16.98■□□□□ 0.31
SRRT-210ENST00000477529 EVX2Q03828 476 aa16.98■□□□□ 0.31
SRRT-210ENST00000477529 SNAPC2Q13487 334 aa16.98■□□□□ 0.31
SRRT-210ENST00000477529 CCDC84Q86UT8 332 aaPredicted RBP16.98■□□□□ 0.31
SRRT-210ENST00000477529 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
SRRT-210ENST00000477529 CRACR2BQ8N4Y2 399 aaPredicted RBP16.98■□□□□ 0.31
SRRT-210ENST00000477529 EHD4Q9H223 541 aa16.98■□□□□ 0.31
SRRT-210ENST00000477529 MCM3APO60318 1980 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 RNF113AO15541 343 aaKnown RBP16.97■□□□□ 0.31
SRRT-210ENST00000477529 PRKAB2O43741 272 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 CETPP11597 493 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 CRHR2Q13324 411 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 MOGSQ13724 837 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 SHROOM1Q2M3G4 852 aaPredicted RBP16.97■□□□□ 0.31
SRRT-210ENST00000477529 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
SRRT-210ENST00000477529 FOXP4Q8IVH2 680 aaPredicted RBP16.97■□□□□ 0.31
SRRT-210ENST00000477529 FAM43AQ8N2R8 423 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 APPBP2Q92624 585 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 FSD1Q9BTV5 496 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 SERPINB13Q9UIV8 391 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 BRCA2P51587 3418 aa16.97■□□□□ 0.31
SRRT-210ENST00000477529 ZFYP08048 801 aaPredicted RBP16.96■□□□□ 0.31
SRRT-210ENST00000477529 PLCD1P51178 756 aa16.96■□□□□ 0.31
SRRT-210ENST00000477529 OSBP2Q969R2 916 aa16.96■□□□□ 0.31
SRRT-210ENST00000477529 MCM9Q9NXL9 1143 aa16.96■□□□□ 0.31
SRRT-210ENST00000477529 AFG3L2Q9Y4W6 797 aa16.96■□□□□ 0.31
SRRT-210ENST00000477529 ZHX2Q9Y6X8 837 aa16.96■□□□□ 0.31
SRRT-210ENST00000477529 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
SRRT-210ENST00000477529 M0R2C6 588 aa16.95■□□□□ 0.3
SRRT-210ENST00000477529 JAG1P78504 1218 aa16.95■□□□□ 0.3
SRRT-210ENST00000477529 OTUD7BQ6GQQ9 843 aa16.95■□□□□ 0.3
SRRT-210ENST00000477529 TTC6Q86TZ1 520 aa16.95■□□□□ 0.3
SRRT-210ENST00000477529 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
SRRT-210ENST00000477529 TRIM34Q9BYJ4 488 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms