RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 C21orf62-AS1Q17RA5 79 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 MINDY4Q4G0A6 757 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 FNDC3BQ53EP0 1204 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 HYIQ5T013 277 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 FBXW10Q5XX13 1052 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ZKSCAN2Q63HK3 967 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 LARP1BQ659C4 914 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PDE12Q6L8Q7 609 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 POTEBQ6S5H4 581 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 MMS22LQ6ZRQ5 1243 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 MORC1Q86VD1 984 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 TREML1Q86YW5 311 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ALDH16A1Q8IZ83 802 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 LRRC47Q8N1G4 583 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 AFAP1L2Q8N4X5 818 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 GOLM1Q8NBJ4 401 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ENOX1Q8TC92 643 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 TTC17Q96AE7 1141 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 HOOK2Q96ED9 719 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 RHOVQ96L33 236 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 IPO9Q96P70 1041 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ELAC2Q9BQ52 826 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 ZBED2Q9BTP6 218 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 FAM126AQ9BYI3 521 aaPredicted RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PUS7LQ9H0K6 701 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 SUV39H2Q9H5I1 410 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 FBRSQ9HAH7 460 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 PTPRHQ9HD43 1115 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 INTS7Q9NVH2 962 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 OBP2AQ9NY56 170 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 UBP1Q9NZI7 540 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 LUZP4Q9P127 313 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 RCAN3Q9UKA8 241 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 RABGAP1Q9Y3P9 1069 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 CEP170Q5SW79 1584 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 SLIT2O94813 1529 aa3.53□□□□□ -1.84
HMGN4-202ENST00000477243 GOLGB1Q14789 3259 aaKnown RBP3.53□□□□□ -1.84
HMGN4-202ENST00000477243 DHX57Q6P158 1386 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 C2CD3Q4AC94 2353 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CFAP47Q6ZTR5 3102 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 PLD2O14939 933 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 DIAPH1O60610 1272 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 PHACTR2O75167 634 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 RNASEH2AO75792 299 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 RAPGEF3O95398 923 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 EYA4O95677 639 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CT47B1P0C2W7 299 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 POTEIP0CG38 1075 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 ZSCAN20P17040 1043 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 MCM4P33991 863 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 PDE6BP35913 854 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CCT5P48643 541 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 SARSP49591 514 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 HTRA3P83110 453 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 FSTL1Q12841 308 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CAMK2GQ13555 558 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 SEPT6Q14141 434 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 SIM2Q14190 667 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 TEAD4Q15561 434 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CCDC96Q2M329 555 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CWF19L2Q2TBE0 894 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 FAM133BQ5BKY9 247 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 FAM26DQ5JW98 314 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 GPR153Q6NV75 609 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 ERAP2Q6P179 960 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CCDC81Q6ZN84 652 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 FAM196AQ6ZSG2 479 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 SPATC1Q76KD6 591 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 EEPD1Q7L9B9 569 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 ZNF438Q7Z4V0 828 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 KRT77Q7Z794 578 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CCDC84Q86UT8 332 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 GALNT12Q8IXK2 581 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 TRMT44Q8IYL2 757 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 IFNL2Q8IZJ0 200 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 REXO1Q8N1G1 1221 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 PPM1KQ8N3J5 372 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 UBR7Q8N806 425 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 FAM169BQ8N8A8 192 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 ZBTB38Q8NAP3 1195 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 RBBP8NLQ8NC74 664 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 KHSRPQ92945 711 aaKnown RBP eCLIP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 SKA1Q96BD8 255 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 MPP4Q96JB8 637 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 GPR101Q96P66 508 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 KCTD15Q96SI1 283 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 STRBPQ96SI9 672 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 KCNK17Q96T54 332 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 CEP44Q9C0F1 390 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 EPN3Q9H201 632 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 NPHS2Q9NP85 383 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 SEPT9Q9UHD8 586 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 ASAP1Q9ULH1 1129 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 NOB1Q9ULX3 412 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 PPT2Q9UMR5 302 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 COLQQ9Y215 455 aaPredicted RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 GRIN2BQ13224 1484 aa3.52□□□□□ -1.85
HMGN4-202ENST00000477243 YTHDC2Q9H6S0 1430 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 RNF17Q9BXT8 1623 aaKnown RBP3.52□□□□□ -1.85
HMGN4-202ENST00000477243 RANBP2P49792 3224 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms