RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PTPRFP10586 1907 aa14.33□□□□□ -0.11
VARS2-208ENST00000477052 GRK4P32298 578 aa14.33□□□□□ -0.12
VARS2-208ENST00000477052 ZAP70P43403 619 aa14.33□□□□□ -0.12
VARS2-208ENST00000477052 JAG1P78504 1218 aa14.33□□□□□ -0.12
VARS2-208ENST00000477052 SPP2Q13103 211 aa14.33□□□□□ -0.12
VARS2-208ENST00000477052 NAA16Q6N069 864 aaPredicted RBP14.33□□□□□ -0.12
VARS2-208ENST00000477052 MAPKAPK5Q8IW41 473 aa14.33□□□□□ -0.12
VARS2-208ENST00000477052 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
VARS2-208ENST00000477052 ZBTB7BO15156 539 aaPredicted RBP14.32□□□□□ -0.12
VARS2-208ENST00000477052 PEX10O60683 326 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 GNRH1P01148 92 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 CCL5P13501 91 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 ELNP15502 786 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 FCGRTP55899 365 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 DYNLL1P63167 89 aaKnown RBP14.32□□□□□ -0.12
VARS2-208ENST00000477052 ANKRD13CQ8N6S4 541 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 PANK1Q8TE04 598 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
VARS2-208ENST00000477052 TGFBRAP1Q8WUH2 860 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 BCL11AQ9H165 835 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 SAP30BPQ9UHR5 308 aaKnown RBP14.32□□□□□ -0.12
VARS2-208ENST00000477052 DBNLQ9UJU6 430 aaKnown RBP14.32□□□□□ -0.12
VARS2-208ENST00000477052 TAOK2Q9UL54 1235 aa14.32□□□□□ -0.12
VARS2-208ENST00000477052 TBC1D12O60347 775 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 HOXD10P28358 340 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 HMGCS2P54868 508 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 PRMT2P55345 433 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 CCDC158Q5M9N0 1113 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 EAF2Q96CJ1 260 aaPredicted RBP14.31□□□□□ -0.12
VARS2-208ENST00000477052 GPR108Q9NPR9 543 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 AGTPBP1Q9UPW5 1226 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 MGAMO43451 1857 aa14.31□□□□□ -0.12
VARS2-208ENST00000477052 SIPA1L1O43166 1804 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
VARS2-208ENST00000477052 CAP2P40123 477 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 FLT3LGP49771 235 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 HABP4Q5JVS0 413 aaKnown RBP14.3□□□□□ -0.12
VARS2-208ENST00000477052 DIEXFQ68CQ4 756 aaKnown RBP14.3□□□□□ -0.12
VARS2-208ENST00000477052 NOL10Q9BSC4 688 aaKnown RBP14.3□□□□□ -0.12
VARS2-208ENST00000477052 RNF208Q9H0X6 261 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 UNC93B1Q9H1C4 597 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 EXOC6BQ9Y2D4 811 aa14.3□□□□□ -0.12
VARS2-208ENST00000477052 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 H0YGN5 161 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 TNPO2O14787 897 aaKnown RBP14.29□□□□□ -0.12
VARS2-208ENST00000477052 ADCY3O60266 1144 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 GDF11O95390 407 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 CYP7A1P22680 504 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 CEP85Q6P2H3 762 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 ZNF280CQ8ND82 737 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 ANTXR1Q9H6X2 564 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 NOP58Q9Y2X3 529 aaKnown RBP14.29□□□□□ -0.12
VARS2-208ENST00000477052 FLT1P17948 1338 aa14.29□□□□□ -0.12
VARS2-208ENST00000477052 USP17L5A8MUK1 530 aa14.28□□□□□ -0.12
VARS2-208ENST00000477052 APBB1O00213 710 aa14.28□□□□□ -0.12
VARS2-208ENST00000477052 IDH1O75874 414 aaKnown RBP14.28□□□□□ -0.12
VARS2-208ENST00000477052 BAG3O95817 575 aa14.28□□□□□ -0.12
VARS2-208ENST00000477052 CDK5RAP2Q96SN8 1893 aa14.28□□□□□ -0.12
VARS2-208ENST00000477052 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
VARS2-208ENST00000477052 SLC45A1Q9Y2W3 748 aa14.28□□□□□ -0.12
VARS2-208ENST00000477052 MAST2Q6P0Q8 1798 aa14.27□□□□□ -0.12
VARS2-208ENST00000477052 COL2A1P02458 1487 aaPredicted RBP14.27□□□□□ -0.12
VARS2-208ENST00000477052 MAP4K4O95819 1239 aaPredicted RBP14.27□□□□□ -0.13
VARS2-208ENST00000477052 INHAP05111 366 aa14.27□□□□□ -0.13
VARS2-208ENST00000477052 PPP4CP60510 307 aa14.27□□□□□ -0.13
VARS2-208ENST00000477052 MTMR2Q13614 643 aa14.27□□□□□ -0.13
VARS2-208ENST00000477052 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.13
VARS2-208ENST00000477052 IL1RAPL2Q9NP60 686 aa14.27□□□□□ -0.13
VARS2-208ENST00000477052 PI4KBQ9UBF8 816 aa14.27□□□□□ -0.13
VARS2-208ENST00000477052 DOCK3Q8IZD9 2030 aa14.27□□□□□ -0.13
VARS2-208ENST00000477052 GJB1P08034 283 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 UBXN2AP68543 259 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 AACSQ86V21 672 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 CRACR2BQ8N4Y2 399 aaPredicted RBP14.26□□□□□ -0.13
VARS2-208ENST00000477052 MAGEB6Q8N7X4 407 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 PROCA1Q8NCQ7 364 aaPredicted RBP14.26□□□□□ -0.13
VARS2-208ENST00000477052 SLAIN1Q8ND83 568 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 DPF3Q92784 378 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 TRIM34Q9BYJ4 488 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 HERC5Q9UII4 1024 aaKnown RBP14.26□□□□□ -0.13
VARS2-208ENST00000477052 LOC285556D6RIA3 1793 aa14.26□□□□□ -0.13
VARS2-208ENST00000477052 CEP290O15078 2479 aa14.25□□□□□ -0.13
VARS2-208ENST00000477052 PLCG2P16885 1265 aa14.25□□□□□ -0.13
VARS2-208ENST00000477052 GJA8P48165 433 aa14.25□□□□□ -0.13
VARS2-208ENST00000477052 TRIM32Q13049 653 aa14.25□□□□□ -0.13
VARS2-208ENST00000477052 U2AF1L4Q8WU68 220 aaKnown RBP14.25□□□□□ -0.13
VARS2-208ENST00000477052 GCC1Q96CN9 775 aa14.25□□□□□ -0.13
VARS2-208ENST00000477052 ZNF512BQ96KM6 892 aaPredicted RBP14.25□□□□□ -0.13
VARS2-208ENST00000477052 DHX36Q9H2U1 1008 aaKnown RBP14.25□□□□□ -0.13
VARS2-208ENST00000477052 PNMA3Q9UL41 463 aa14.25□□□□□ -0.13
VARS2-208ENST00000477052 EVX2Q03828 476 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 ZYXQ15942 572 aaKnown RBP14.24□□□□□ -0.13
VARS2-208ENST00000477052 FAM110CQ1W6H9 321 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 SH3D19Q5HYK7 790 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 COA7Q96BR5 231 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
VARS2-208ENST00000477052 P2RX7Q99572 595 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms