RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MOGSQ13724 837 aa25.69■■□□□ 1.7
LIME1-204ENST00000476183 PICK1Q9NRD5 415 aa25.69■■□□□ 1.7
LIME1-204ENST00000476183 PI4KBQ9UBF8 816 aa25.69■■□□□ 1.7
LIME1-204ENST00000476183 SAP30BPQ9UHR5 308 aaKnown RBP25.69■■□□□ 1.7
LIME1-204ENST00000476183 PALD1Q9ULE6 856 aa25.69■■□□□ 1.7
LIME1-204ENST00000476183 ZHX2Q9Y6X8 837 aa25.69■■□□□ 1.7
LIME1-204ENST00000476183 PHIPQ8WWQ0 1821 aa25.69■■□□□ 1.7
LIME1-204ENST00000476183 ZNF532Q9HCE3 1301 aa25.68■■□□□ 1.7
LIME1-204ENST00000476183 TAF1CQ15572 869 aaPredicted RBP25.68■■□□□ 1.7
LIME1-204ENST00000476183 SLFNL1Q499Z3 407 aa25.68■■□□□ 1.7
LIME1-204ENST00000476183 CCDC84Q86UT8 332 aaPredicted RBP25.67■■□□□ 1.7
LIME1-204ENST00000476183 CERS3Q8IU89 383 aa25.67■■□□□ 1.7
LIME1-204ENST00000476183 DNAJC18Q9H819 358 aa25.67■■□□□ 1.7
LIME1-204ENST00000476183 ECHDC1Q9NTX5 307 aa25.67■■□□□ 1.7
LIME1-204ENST00000476183 HERC5Q9UII4 1024 aaKnown RBP25.67■■□□□ 1.7
LIME1-204ENST00000476183 AFG3L2Q9Y4W6 797 aa25.67■■□□□ 1.7
LIME1-204ENST00000476183 MYH1P12882 1939 aa25.67■■□□□ 1.7
LIME1-204ENST00000476183 MAGEB6P1A0A0J9YX57 407 aa25.66■■□□□ 1.7
LIME1-204ENST00000476183 CXCL11O14625 94 aa25.66■■□□□ 1.7
LIME1-204ENST00000476183 USP5P45974 858 aa25.66■■□□□ 1.7
LIME1-204ENST00000476183 SLC4A8Q2Y0W8 1093 aa25.66■■□□□ 1.7
LIME1-204ENST00000476183 TSHZ3Q63HK5 1081 aa25.66■■□□□ 1.7
LIME1-204ENST00000476183 METTL16Q86W50 562 aaKnown RBP25.66■■□□□ 1.7
LIME1-204ENST00000476183 CHGBP05060 677 aa25.65■■□□□ 1.7
LIME1-204ENST00000476183 ZFYVE28Q9HCC9 887 aa25.65■■□□□ 1.7
LIME1-204ENST00000476183 ZCCHC17Q9NP64 241 aaKnown RBP25.65■■□□□ 1.7
LIME1-204ENST00000476183 ATAD5Q96QE3 1844 aa25.65■■□□□ 1.7
LIME1-204ENST00000476183 PTPRFP10586 1907 aa25.65■■□□□ 1.7
LIME1-204ENST00000476183 ADD2P35612 726 aa25.64■■□□□ 1.7
LIME1-204ENST00000476183 CAP2P40123 477 aa25.64■■□□□ 1.7
LIME1-204ENST00000476183 MYH7P12883 1935 aa25.63■■□□□ 1.69
LIME1-204ENST00000476183 CAP1Q01518 475 aa25.63■■□□□ 1.69
LIME1-204ENST00000476183 ANKRD23Q86SG2 305 aa25.63■■□□□ 1.69
LIME1-204ENST00000476183 FOXP4Q8IVH2 680 aaPredicted RBP25.63■■□□□ 1.69
LIME1-204ENST00000476183 OTUD7AQ8TE49 926 aaPredicted RBP25.63■■□□□ 1.69
LIME1-204ENST00000476183 A0A0G2JLL6 359 aaPredicted RBP25.62■■□□□ 1.69
LIME1-204ENST00000476183 JAG1P78504 1218 aa25.62■■□□□ 1.69
LIME1-204ENST00000476183 GPAT2Q6NUI2 795 aa25.62■■□□□ 1.69
LIME1-204ENST00000476183 PRRT2Q7Z6L0 340 aaPredicted RBP25.62■■□□□ 1.69
LIME1-204ENST00000476183 LCORLQ8N3X6 602 aa25.62■■□□□ 1.69
LIME1-204ENST00000476183 DDX60LQ5H9U9 1706 aaKnown RBP25.62■■□□□ 1.69
LIME1-204ENST00000476183 TRIM75PA6NK02 468 aa25.61■■□□□ 1.69
LIME1-204ENST00000476183 CCDC85CA6NKD9 419 aa25.61■■□□□ 1.69
LIME1-204ENST00000476183 PDHXO00330 501 aa25.61■■□□□ 1.69
LIME1-204ENST00000476183 HLA-DOAP06340 250 aa25.61■■□□□ 1.69
LIME1-204ENST00000476183 SP3Q02447 781 aa25.61■■□□□ 1.69
LIME1-204ENST00000476183 SHROOM1Q2M3G4 852 aaPredicted RBP25.61■■□□□ 1.69
LIME1-204ENST00000476183 CRACR2BQ8N4Y2 399 aaPredicted RBP25.61■■□□□ 1.69
LIME1-204ENST00000476183 CD99L2Q8TCZ2 262 aa25.61■■□□□ 1.69
LIME1-204ENST00000476183 NAV1Q8NEY1 1877 aa25.6■■□□□ 1.69
LIME1-204ENST00000476183 TLR2O60603 784 aa25.6■■□□□ 1.69
LIME1-204ENST00000476183 HDAC1Q13547 482 aaPredicted RBP25.6■■□□□ 1.69
LIME1-204ENST00000476183 GPATCH3Q96I76 525 aa25.6■■□□□ 1.69
LIME1-204ENST00000476183 CRNKL1Q9BZJ0 848 aaKnown RBP25.6■■□□□ 1.69
LIME1-204ENST00000476183 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.6■■□□□ 1.691e-9■■■■■ 29
LIME1-204ENST00000476183 ARMT1Q9H993 441 aa25.6■■□□□ 1.69
LIME1-204ENST00000476183 HTTP42858 3142 aa25.6■■□□□ 1.69
LIME1-204ENST00000476183 PKN2Q16513 984 aaKnown RBP25.59■■□□□ 1.69
LIME1-204ENST00000476183 EXOC6Q8TAG9 804 aa25.59■■□□□ 1.69
LIME1-204ENST00000476183 SDR42E1Q8WUS8 393 aa25.59■■□□□ 1.69
LIME1-204ENST00000476183 ERO1AQ96HE7 468 aa25.59■■□□□ 1.69
LIME1-204ENST00000476183 MBD4O95243 580 aa25.58■■□□□ 1.69
LIME1-204ENST00000476183 UBE3CQ15386 1083 aa25.58■■□□□ 1.69
LIME1-204ENST00000476183 OTOP1Q7RTM1 612 aa25.58■■□□□ 1.69
LIME1-204ENST00000476183 TRIM34Q9BYJ4 488 aa25.58■■□□□ 1.69
LIME1-204ENST00000476183 TRIM17Q9Y577 477 aa25.58■■□□□ 1.69
LIME1-204ENST00000476183 PRKAB2O43741 272 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 GDF11O95390 407 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 PLCD1P51178 756 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 EVX2Q03828 476 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 SPP2Q13103 211 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 GADL1Q6ZQY3 521 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 FASTKD5Q7L8L6 764 aaKnown RBP25.57■■□□□ 1.68
LIME1-204ENST00000476183 EHD4Q9H223 541 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 DCP1AQ9NPI6 582 aaPredicted RBP25.57■■□□□ 1.68
LIME1-204ENST00000476183 SUPT16HQ9Y5B9 1047 aaKnown RBP25.57■■□□□ 1.68
LIME1-204ENST00000476183 ADGRA2Q96PE1 1338 aa25.57■■□□□ 1.68
LIME1-204ENST00000476183 USP17L5A8MUK1 530 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 AAMPQ13685 434 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 ANKRD45Q5TZF3 282 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 C17orf99Q6UX52 265 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 TTC6Q86TZ1 520 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 KBTBD3Q8NAB2 608 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 ZNF280CQ8ND82 737 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 PI4K2BQ8TCG2 481 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 SERPINB13Q9UIV8 391 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 HPS5Q9UPZ3 1129 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 TTC41PQ6P2S7 1318 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 SALL3Q9BXA9 1300 aa25.56■■□□□ 1.68
LIME1-204ENST00000476183 CYP2C8P10632 490 aa25.55■■□□□ 1.68
LIME1-204ENST00000476183 TATDN1Q6P1N9 297 aa25.55■■□□□ 1.68
LIME1-204ENST00000476183 FBXO46Q6PJ61 603 aaPredicted RBP25.55■■□□□ 1.68
LIME1-204ENST00000476183 GCC1Q96CN9 775 aa25.55■■□□□ 1.68
LIME1-204ENST00000476183 PUS7LQ9H0K6 701 aaKnown RBP25.55■■□□□ 1.68
LIME1-204ENST00000476183 MCM9Q9NXL9 1143 aa25.55■■□□□ 1.68
LIME1-204ENST00000476183 CPA4Q9UI42 421 aa25.55■■□□□ 1.68
LIME1-204ENST00000476183 ZSWIM8A7E2V4 1837 aa25.54■■□□□ 1.68
LIME1-204ENST00000476183 POLR3DP05423 398 aaPredicted RBP25.54■■□□□ 1.68
LIME1-204ENST00000476183 ASNSP08243 561 aa25.54■■□□□ 1.68
LIME1-204ENST00000476183 ZSCAN25Q6NSZ9 544 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms