RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
SNX5-208ENST00000475716 SEMA6BQ9H3T3 888 aa12.5□□□□□ -0.41
SNX5-208ENST00000475716 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
SNX5-208ENST00000475716 KIF16BQ96L93 1317 aa12.5□□□□□ -0.41
SNX5-208ENST00000475716 DDX60LQ5H9U9 1706 aaKnown RBP12.49□□□□□ -0.41
SNX5-208ENST00000475716 EYA2O00167 538 aa12.49□□□□□ -0.41
SNX5-208ENST00000475716 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
SNX5-208ENST00000475716 CCL14Q16627 93 aa12.49□□□□□ -0.41
SNX5-208ENST00000475716 ATG9AQ7Z3C6 839 aa12.49□□□□□ -0.41
SNX5-208ENST00000475716 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
SNX5-208ENST00000475716 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
SNX5-208ENST00000475716 CDH23Q9H251 3354 aa12.49□□□□□ -0.41
SNX5-208ENST00000475716 MUC3AQ02505 3323 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 PHKA1P46020 1223 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 Q3C1V9 767 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 ZNF697Q5TEC3 545 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 ZNF280CQ8ND82 737 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 MAFAQ8NHW3 353 aaPredicted RBP12.48□□□□□ -0.41
SNX5-208ENST00000475716 SENP6Q9GZR1 1112 aaPredicted RBP12.48□□□□□ -0.41
SNX5-208ENST00000475716 TXNRD2Q9NNW7 524 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 MORF4L1Q9UBU8 362 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
SNX5-208ENST00000475716 GAKO14976 1311 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 TBC1D12O60347 775 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
SNX5-208ENST00000475716 SHHQ15465 462 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 WDR63Q8IWG1 891 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 MYLIPQ8WY64 445 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 USP6NLQ92738 828 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 LBHD1Q9BQE6 289 aaPredicted RBP12.47□□□□□ -0.41
SNX5-208ENST00000475716 NUDT12Q9BQG2 462 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 USP44Q9H0E7 712 aa12.47□□□□□ -0.41
SNX5-208ENST00000475716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.47□□□□□ -0.41
SNX5-208ENST00000475716 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.41
SNX5-208ENST00000475716 COL9A1P20849 921 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 ADORA1P30542 326 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 BTDP43251 543 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNX5-208ENST00000475716 C9orf50Q5SZB4 431 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 SIL1Q9H173 461 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 TTYH1Q9H313 450 aaPredicted RBP12.46□□□□□ -0.41
SNX5-208ENST00000475716 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
SNX5-208ENST00000475716 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 DENND2AQ9ULE3 1009 aa12.46□□□□□ -0.41
SNX5-208ENST00000475716 PHIPQ8WWQ0 1821 aa12.46□□□□□ -0.42
SNX5-208ENST00000475716 ZKSCAN1P17029 563 aaPredicted RBP12.45□□□□□ -0.42
SNX5-208ENST00000475716 CAP2P40123 477 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 RHBDL3P58872 404 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 JAG1P78504 1218 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 SH3D19Q5HYK7 790 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 GPRC5AQ8NFJ5 357 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 ZNF384Q8TF68 577 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
SNX5-208ENST00000475716 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
SNX5-208ENST00000475716 PORCNQ9H237 461 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 ABCF2Q9UG63 623 aa12.45□□□□□ -0.42
SNX5-208ENST00000475716 COL2A1P02458 1487 aaPredicted RBP12.45□□□□□ -0.42
SNX5-208ENST00000475716 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
SNX5-208ENST00000475716 USP17L5A8MUK1 530 aa12.44□□□□□ -0.42
SNX5-208ENST00000475716 MORN1Q5T089 497 aa12.44□□□□□ -0.42
SNX5-208ENST00000475716 DZIP1Q86YF9 867 aaKnown RBP12.44□□□□□ -0.42
SNX5-208ENST00000475716 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
SNX5-208ENST00000475716 PTPRFP10586 1907 aa12.44□□□□□ -0.42
SNX5-208ENST00000475716 CACNA1FO60840 1977 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 GPR75-ASB3A0A0A6YYF3 556 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 HOXA7P31268 230 aaPredicted RBP12.43□□□□□ -0.42
SNX5-208ENST00000475716 TIMM10P62072 90 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 HERVK_113P62684 666 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
SNX5-208ENST00000475716 MTMR2Q13614 643 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 SHROOM1Q2M3G4 852 aaPredicted RBP12.43□□□□□ -0.42
SNX5-208ENST00000475716 CCDC102BQ68D86 513 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 GPR142Q7Z601 462 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 FLRT1Q9NZU1 646 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
SNX5-208ENST00000475716 SEMA3EO15041 775 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 RGS2P41220 211 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 BACE1P56817 501 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 RTP1P59025 263 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 MECOMQ03112 1051 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 TRMT44Q8IYL2 757 aaKnown RBP12.42□□□□□ -0.42
SNX5-208ENST00000475716 MRPL50Q8N5N7 158 aaKnown RBP12.42□□□□□ -0.42
SNX5-208ENST00000475716 SOCS4Q8WXH5 440 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 PAGR1Q9BTK6 254 aa12.42□□□□□ -0.42
SNX5-208ENST00000475716 MROH7-TTC4A0A0A0MT08 1334 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 FOSL2P15408 326 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 CNGA1P29973 690 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 MAPK4P31152 587 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 ERVK-9P63128 1117 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 ERVK-24P63145 666 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
SNX5-208ENST00000475716 CCAR1Q8IX12 1150 aaKnown RBP12.41□□□□□ -0.42
SNX5-208ENST00000475716 SLF2Q8IX21 1173 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms