RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 KIF22Q14807 665 aa22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 TGFBRAP1Q8WUH2 860 aa22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 DHX36Q9H2U1 1008 aaKnown RBP22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 PI4KBQ9UBF8 816 aa22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 HERC5Q9UII4 1024 aaKnown RBP22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 PTCH2Q9Y6C5 1203 aa22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
DNMT3A-210ENST00000474807 SIPA1L1O43166 1804 aa22.45■■□□□ 1.19
DNMT3A-210ENST00000474807 GNRH1P01148 92 aa22.45■■□□□ 1.18
DNMT3A-210ENST00000474807 RRP1BQ14684 758 aaKnown RBP22.45■■□□□ 1.18
DNMT3A-210ENST00000474807 CCDC84Q86UT8 332 aaPredicted RBP22.45■■□□□ 1.18
DNMT3A-210ENST00000474807 PARK7Q99497 189 aaKnown RBP22.45■■□□□ 1.18
DNMT3A-210ENST00000474807 ANTXR1Q9H6X2 564 aa22.45■■□□□ 1.18
DNMT3A-210ENST00000474807 FLT1P17948 1338 aa22.45■■□□□ 1.18
DNMT3A-210ENST00000474807 TRIM75PA6NK02 468 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 HMMRO75330 724 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 IDH1O75874 414 aaKnown RBP22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 CYP2C8P10632 490 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 CYP7A1P22680 504 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 CTGFP29279 349 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 CAP2P40123 477 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 DYNLL1P63167 89 aaKnown RBP22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 METTL16Q86W50 562 aaKnown RBP22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 MAPKAPK5Q8IW41 473 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 KIF1BPQ96EK5 621 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 SLC45A1Q9Y2W3 748 aa22.44■■□□□ 1.18
DNMT3A-210ENST00000474807 POTEFA5A3E0 1075 aa22.43■■□□□ 1.18
DNMT3A-210ENST00000474807 BCRP11274 1271 aa22.43■■□□□ 1.18
DNMT3A-210ENST00000474807 GADL1Q6ZQY3 521 aa22.43■■□□□ 1.18
DNMT3A-210ENST00000474807 ZNF333Q96JL9 665 aa22.43■■□□□ 1.18
DNMT3A-210ENST00000474807 CHMP4BQ9H444 224 aaKnown RBP22.43■■□□□ 1.18
DNMT3A-210ENST00000474807 ATAD5Q96QE3 1844 aa22.43■■□□□ 1.18
DNMT3A-210ENST00000474807 C20orf194Q5TEA3 1177 aa22.42■■□□□ 1.18
DNMT3A-210ENST00000474807 CLASRPQ8N2M8 674 aaKnown RBP22.42■■□□□ 1.18
DNMT3A-210ENST00000474807 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
DNMT3A-210ENST00000474807 RBBP6Q7Z6E9 1792 aaKnown RBP22.42■■□□□ 1.18
DNMT3A-210ENST00000474807 PSMC4P43686 418 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 PRMT2P55345 433 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 PDE3AQ14432 1141 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 SLC9C1Q4G0N8 1177 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 TMED8Q6PL24 325 aaPredicted RBP22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 FOXP4Q8IVH2 680 aaPredicted RBP22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 TRIM47Q96LD4 638 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 TBC1D2Q9BYX2 928 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 DNAJC18Q9H819 358 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 PALD1Q9ULE6 856 aa22.41■■□□□ 1.18
DNMT3A-210ENST00000474807 APBB1O00213 710 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 RAB11FIP3O75154 756 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 ECM2O94769 699 aaPredicted RBP22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 MAP3K12Q12852 859 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 SPP2Q13103 211 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 NBPF11Q86T75 865 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 MIGA1Q8NAN2 632 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 ZNF280CQ8ND82 737 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 AGTPBP1Q9UPW5 1226 aa22.4■■□□□ 1.18
DNMT3A-210ENST00000474807 CERS3Q8IU89 383 aa22.39■■□□□ 1.17
DNMT3A-210ENST00000474807 SRRDQ9UH36 339 aa22.39■■□□□ 1.17
DNMT3A-210ENST00000474807 USP17L5A8MUK1 530 aa22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 OSBPP22059 807 aa22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 JAG1P78504 1218 aa22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 TREML2Q5T2D2 321 aa22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 PROCA1Q8NCQ7 364 aaPredicted RBP22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 SAP30BPQ9UHR5 308 aaKnown RBP22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 PDE4DIPQ5VU43 2346 aa22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 LOC285556D6RIA3 1793 aa22.38■■□□□ 1.17
DNMT3A-210ENST00000474807 FMNL1O95466 1100 aaPredicted RBP22.37■■□□□ 1.17
DNMT3A-210ENST00000474807 IFIT2P09913 472 aaKnown RBP22.37■■□□□ 1.17
DNMT3A-210ENST00000474807 TTF1Q15361 905 aaPredicted RBP22.37■■□□□ 1.17
DNMT3A-210ENST00000474807 SH3D19Q5HYK7 790 aa22.37■■□□□ 1.17
DNMT3A-210ENST00000474807 SH3TC2Q8TF17 1288 aa22.37■■□□□ 1.17
DNMT3A-210ENST00000474807 HLA-DOAP06340 250 aa22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 ASNSP08243 561 aa22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 HOXD10P28358 340 aa22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 CRACR2BQ8N4Y2 399 aaPredicted RBP22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 RIOK1Q9BRS2 568 aaKnown RBP22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 WDR18Q9BV38 432 aa22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 AS3MTQ9HBK9 375 aa22.36■■□□□ 1.17
DNMT3A-210ENST00000474807 KIAA0100Q14667 2235 aaKnown RBP22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 MGAMO43451 1857 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 EN2P19622 333 aaPredicted RBP22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 USP5P45974 858 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 HMGCS2P54868 508 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 FCGRTP55899 365 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 SMCR8Q8TEV9 937 aaPredicted RBP22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 TMEM106CQ9BVX2 250 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 GINM1Q9NU53 330 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 MYH1P12882 1939 aa22.35■■□□□ 1.17
DNMT3A-210ENST00000474807 MYPNQ86TC9 1320 aa22.34■■□□□ 1.17
DNMT3A-210ENST00000474807 SHROOM1Q2M3G4 852 aaPredicted RBP22.34■■□□□ 1.17
DNMT3A-210ENST00000474807 SLC4A8Q2Y0W8 1093 aa22.34■■□□□ 1.17
DNMT3A-210ENST00000474807 SLC9C2Q5TAH2 1124 aa22.34■■□□□ 1.17
DNMT3A-210ENST00000474807 TRIM34Q9BYJ4 488 aa22.34■■□□□ 1.17
DNMT3A-210ENST00000474807 PNMA3Q9UL41 463 aa22.34■■□□□ 1.17
DNMT3A-210ENST00000474807 GOLIM4O00461 696 aa22.33■■□□□ 1.17
DNMT3A-210ENST00000474807 GDF11O95390 407 aa22.33■■□□□ 1.17
DNMT3A-210ENST00000474807 PDE6AP16499 860 aa22.33■■□□□ 1.17
DNMT3A-210ENST00000474807 DNAJC2Q99543 621 aaKnown RBP22.33■■□□□ 1.17
DNMT3A-210ENST00000474807 TCRBV5S4A2TA0A5A2 114 aa22.32■■□□□ 1.16
DNMT3A-210ENST00000474807 BACE1P56817 501 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms