RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 XAGE2Q96GT9 111 aa15.69■□□□□ 0.1
TRAF4-209ENST00000473421 NOB1Q9ULX3 412 aaKnown RBP15.69■□□□□ 0.1
TRAF4-209ENST00000473421 A0A1B0GUL7 405 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 HMGCS2P54868 508 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 FAM110CQ1W6H9 321 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 POTEEQ6S8J3 1075 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 COA7Q96BR5 231 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 ASCC2Q9H1I8 757 aaPredicted RBP15.68■□□□□ 0.1
TRAF4-209ENST00000473421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRAF4-209ENST00000473421 COPRSQ9NQ92 184 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 SMC4Q9NTJ3 1288 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 FBXO3Q9UK99 471 aa15.68■□□□□ 0.1
TRAF4-209ENST00000473421 LOC285556D6RIA3 1793 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 ATAD5Q96QE3 1844 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 E9PSI1 815 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 ZBTB22O15209 634 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 TBC1D12O60347 775 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 NECAB2Q7Z6G3 386 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 TRIB2Q92519 343 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 HMG20BQ9P0W2 317 aa15.67■□□□□ 0.1
TRAF4-209ENST00000473421 SIPA1L1O43166 1804 aa15.66■□□□□ 0.1
TRAF4-209ENST00000473421 A0A1W2PPC1 479 aa15.66■□□□□ 0.1
TRAF4-209ENST00000473421 ZNF280CQ8ND82 737 aa15.66■□□□□ 0.1
TRAF4-209ENST00000473421 NSUN4Q96CB9 384 aaKnown RBP15.66■□□□□ 0.1
TRAF4-209ENST00000473421 TXNRD2Q9NNW7 524 aa15.66■□□□□ 0.1
TRAF4-209ENST00000473421 LAMA2P24043 3122 aaKnown RBP15.66■□□□□ 0.1
TRAF4-209ENST00000473421 DDX60LQ5H9U9 1706 aaKnown RBP15.65■□□□□ 0.1
TRAF4-209ENST00000473421 CAP2P40123 477 aa15.65■□□□□ 0.1
TRAF4-209ENST00000473421 ALDH1L2Q3SY69 923 aa15.65■□□□□ 0.1
TRAF4-209ENST00000473421 ERICH6Q7L0X2 663 aa15.65■□□□□ 0.1
TRAF4-209ENST00000473421 ZGPATQ8N5A5 531 aaKnown RBP15.65■□□□□ 0.1
TRAF4-209ENST00000473421 PROCA1Q8NCQ7 364 aaPredicted RBP15.65■□□□□ 0.1
TRAF4-209ENST00000473421 TNNQ9UQP3 1299 aa15.65■□□□□ 0.1
TRAF4-209ENST00000473421 PFASO15067 1338 aa15.65■□□□□ 0.1
TRAF4-209ENST00000473421 PDS5AQ29RF7 1337 aaKnown RBP15.65■□□□□ 0.1
TRAF4-209ENST00000473421 HMGCRP04035 888 aa15.64■□□□□ 0.09
TRAF4-209ENST00000473421 CYP2B6P20813 491 aa15.64■□□□□ 0.09
TRAF4-209ENST00000473421 MAGEA10P43363 369 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-209ENST00000473421 DNAH12Q6ZR08 3092 aa15.64■□□□□ 0.09
TRAF4-209ENST00000473421 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
TRAF4-209ENST00000473421 SH3RF3Q8TEJ3 882 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-209ENST00000473421 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
TRAF4-209ENST00000473421 OSBPL5Q9H0X9 879 aaPredicted RBP15.64■□□□□ 0.09
TRAF4-209ENST00000473421 DNAJC18Q9H819 358 aa15.64■□□□□ 0.09
TRAF4-209ENST00000473421 UNC80Q8N2C7 3258 aa15.64■□□□□ 0.09
TRAF4-209ENST00000473421 RPTORQ8N122 1335 aa15.64■□□□□ 0.09
TRAF4-209ENST00000473421 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
TRAF4-209ENST00000473421 BMP8BP34820 402 aa15.63■□□□□ 0.09
TRAF4-209ENST00000473421 MTMR2Q13614 643 aa15.63■□□□□ 0.09
TRAF4-209ENST00000473421 Q3C1V9 767 aa15.63■□□□□ 0.09
TRAF4-209ENST00000473421 SH3D19Q5HYK7 790 aa15.63■□□□□ 0.09
TRAF4-209ENST00000473421 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
TRAF4-209ENST00000473421 HMX1Q9NP08 348 aaPredicted RBP15.63■□□□□ 0.09
TRAF4-209ENST00000473421 OGDHLQ9ULD0 1010 aa15.63■□□□□ 0.09
TRAF4-209ENST00000473421 USP17L5A8MUK1 530 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 MCAMP43121 646 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 GCLCP48506 637 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-209ENST00000473421 CCL14Q16627 93 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 MAP3K21Q5TCX8 1036 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 SPTY2D1Q68D10 685 aaPredicted RBP15.62■□□□□ 0.09
TRAF4-209ENST00000473421 ADGRA1Q86SQ6 560 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 DEFB123Q8N688 67 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 SPATA5Q8NB90 893 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 NBPF3Q9H094 633 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 PNMA3Q9UL41 463 aa15.62■□□□□ 0.09
TRAF4-209ENST00000473421 SRGAP3O43295 1099 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
TRAF4-209ENST00000473421 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 ANKLE1Q8NAG6 615 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 PORCNQ9H237 461 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 C11orf49Q9H6J7 331 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 SNRKQ9NRH2 765 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 RAI14Q9P0K7 980 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 RBPJLQ9UBG7 517 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 MORF4L1Q9UBU8 362 aa15.61■□□□□ 0.09
TRAF4-209ENST00000473421 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-209ENST00000473421 CCND3P30281 292 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-209ENST00000473421 CACNB2Q08289 660 aaPredicted RBP15.6■□□□□ 0.09
TRAF4-209ENST00000473421 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
TRAF4-209ENST00000473421 LHX8Q68G74 356 aa15.6■□□□□ 0.09
TRAF4-209ENST00000473421 TEX11Q8IYF3 940 aa15.6■□□□□ 0.09
TRAF4-209ENST00000473421 USP6NLQ92738 828 aa15.6■□□□□ 0.09
TRAF4-209ENST00000473421 MTMR10Q9NXD2 777 aa15.6■□□□□ 0.09
TRAF4-209ENST00000473421 COL2A1P02458 1487 aaPredicted RBP15.59■□□□□ 0.09
TRAF4-209ENST00000473421 EYSQ5T1H1 3165 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 CUL9Q8IWT3 2517 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
TRAF4-209ENST00000473421 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 GDF11O95390 407 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 COL6A1P12109 1028 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 ARID4AP29374 1257 aaPredicted RBP15.59■□□□□ 0.09
TRAF4-209ENST00000473421 BACE1P56817 501 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 LRRC26Q2I0M4 334 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 WDR18Q9BV38 432 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 AATFQ9NY61 560 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRAF4-209ENST00000473421 CDK5RAP2Q96SN8 1893 aa15.59■□□□□ 0.09
TRAF4-209ENST00000473421 HERVK_113P62684 666 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 MTX1Q13505 466 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 LRIT3Q3SXY7 679 aa15.58■□□□□ 0.08
TRAF4-209ENST00000473421 MAPKAPK5Q8IW41 473 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms