RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SLC9C2Q5TAH2 1124 aa13.97□□□□□ -0.17
CPNE1-222ENST00000473373 GADL1Q6ZQY3 521 aa13.97□□□□□ -0.17
CPNE1-222ENST00000473373 BRI3BPQ8WY22 251 aa13.97□□□□□ -0.17
CPNE1-222ENST00000473373 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
CPNE1-222ENST00000473373 DHX36Q9H2U1 1008 aaKnown RBP13.97□□□□□ -0.17
CPNE1-222ENST00000473373 PAG1Q9NWQ8 432 aa13.97□□□□□ -0.17
CPNE1-222ENST00000473373 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 FLT1P17948 1338 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 MAGEB6P1A0A0J9YX57 407 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 NOL9Q5SY16 702 aaKnown RBP13.96□□□□□ -0.17
CPNE1-222ENST00000473373 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 ADGRA1Q86SQ6 560 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPNE1-222ENST00000473373 ERO1AQ96HE7 468 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 MS4A4AQ96JQ5 239 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 PI4KBQ9UBF8 816 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.17
CPNE1-222ENST00000473373 ATRNL1Q5VV63 1379 aa13.96□□□□□ -0.18
CPNE1-222ENST00000473373 SIPA1L1O43166 1804 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 COL2A1P02458 1487 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-222ENST00000473373 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
CPNE1-222ENST00000473373 PPP4CP60510 307 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 KIF22Q14807 665 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 CFHR5Q9BXR6 569 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 CRNKL1Q9BZJ0 848 aaKnown RBP13.95□□□□□ -0.18
CPNE1-222ENST00000473373 HERC5Q9UII4 1024 aaKnown RBP13.95□□□□□ -0.18
CPNE1-222ENST00000473373 PALD1Q9ULE6 856 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
CPNE1-222ENST00000473373 TESPA1A2RU30 521 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-222ENST00000473373 TRIM75PA6NK02 468 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 MGAMO43451 1857 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-222ENST00000473373 POLR3DP05423 398 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-222ENST00000473373 SLURP2P0DP57 97 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 ATP5JP18859 108 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 SP3Q02447 781 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 TMED8Q6PL24 325 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-222ENST00000473373 FAM43AQ8N2R8 423 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 EDC3Q96F86 508 aaKnown RBP13.94□□□□□ -0.18
CPNE1-222ENST00000473373 DDRGK1Q96HY6 314 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 PTPN18Q99952 460 aa13.94□□□□□ -0.18
CPNE1-222ENST00000473373 ZNF532Q9HCE3 1301 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 TBC1D12O60347 775 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 PDE6AP16499 860 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 PTPRAP18433 802 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 FASTKD5Q7L8L6 764 aaKnown RBP13.93□□□□□ -0.18
CPNE1-222ENST00000473373 OTOP1Q7RTM1 612 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 DCTPP1Q9H773 170 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 ECHDC1Q9NTX5 307 aa13.93□□□□□ -0.18
CPNE1-222ENST00000473373 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
CPNE1-222ENST00000473373 PDHXO00330 501 aa13.92□□□□□ -0.18
CPNE1-222ENST00000473373 CXCL11O14625 94 aa13.92□□□□□ -0.18
CPNE1-222ENST00000473373 TTC6Q86TZ1 520 aa13.92□□□□□ -0.18
CPNE1-222ENST00000473373 FOXP4Q8IVH2 680 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-222ENST00000473373 HAUS7Q99871 368 aa13.92□□□□□ -0.18
CPNE1-222ENST00000473373 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
CPNE1-222ENST00000473373 ERC2O15083 957 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 CAP2P40123 477 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 ANKRD23Q86SG2 305 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 CCDC84Q86UT8 332 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-222ENST00000473373 SMCR8Q8TEV9 937 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-222ENST00000473373 GCC1Q96CN9 775 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 PARK7Q99497 189 aaKnown RBP13.91□□□□□ -0.18
CPNE1-222ENST00000473373 EFCC1Q9HA90 598 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 ZCCHC17Q9NP64 241 aaKnown RBP13.91□□□□□ -0.18
CPNE1-222ENST00000473373 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.91□□□□□ -0.18
CPNE1-222ENST00000473373 KCNH4Q9UQ05 1017 aa13.91□□□□□ -0.18
CPNE1-222ENST00000473373 ZSWIM8A7E2V4 1837 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 USP17L5A8MUK1 530 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 GDF11O95390 407 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 ASNSP08243 561 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 LRRFIP1Q32MZ4 808 aaKnown RBP13.9□□□□□ -0.18
CPNE1-222ENST00000473373 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
CPNE1-222ENST00000473373 ANKRD45Q5TZF3 282 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 ARMT1Q9H993 441 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 PTPN22Q9Y2R2 807 aa13.9□□□□□ -0.18
CPNE1-222ENST00000473373 LOC285556D6RIA3 1793 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 TLR2O60603 784 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 MBD4O95243 580 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 ADD2P35612 726 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 MAP3K10Q02779 954 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 SPP2Q13103 211 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 SDR42E1Q8WUS8 393 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 TMOD4Q9NZQ9 345 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 CPA4Q9UI42 421 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 SERPINB13Q9UIV8 391 aa13.89□□□□□ -0.19
CPNE1-222ENST00000473373 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms