RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.54
APTX-216ENST00000472896 ST7Q9NRC1 585 aa11.71□□□□□ -0.54
APTX-216ENST00000472896 DDX60Q8IY21 1712 aaKnown RBP11.7□□□□□ -0.54
APTX-216ENST00000472896 CCP110O43303 1012 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 DHX16O60231 1041 aaKnown RBP11.7□□□□□ -0.54
APTX-216ENST00000472896 CCDC144BQ3MJ40 725 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 AXDND1Q5T1B0 1012 aaPredicted RBP11.7□□□□□ -0.54
APTX-216ENST00000472896 RSBN1LQ6PCB5 846 aaPredicted RBP11.7□□□□□ -0.54
APTX-216ENST00000472896 KRBA2Q6ZNG9 492 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 CCDC144CPQ8IYA2 1237 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 FBXO18Q8NFZ0 1043 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 LRRCC1Q9C099 1032 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 SEC31BQ9NQW1 1179 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
APTX-216ENST00000472896 MYO1CO00159 1063 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 PDCP20941 246 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 GJB2P29033 226 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 AK2P54819 239 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 CCZ1BP86790 482 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 CCZ1P86791 482 aaPredicted RBP11.69□□□□□ -0.54
APTX-216ENST00000472896 SYT10Q6XYQ8 523 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 GTF3C6Q969F1 213 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 SNX14Q9Y5W7 946 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 POTEFA5A3E0 1075 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 GOLGA6L4A6NEF3 574 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 WTIPA6NIX2 430 aaPredicted RBP11.69□□□□□ -0.54
APTX-216ENST00000472896 NRDCO43847 1150 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 UFL1O94874 794 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 CCT4P50991 539 aaKnown RBP11.69□□□□□ -0.54
APTX-216ENST00000472896 SNW1Q13573 536 aaKnown RBP11.69□□□□□ -0.54
APTX-216ENST00000472896 RUFY3Q7L099 469 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 TTC6Q86TZ1 520 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 PLBD2Q8NHP8 589 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 EXOC4Q96A65 974 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 MYOZ2Q9NPC6 264 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.69□□□□□ -0.54
APTX-216ENST00000472896 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.69□□□□□ -0.54
APTX-216ENST00000472896 LRRFIP2Q9Y608 721 aaKnown RBP11.69□□□□□ -0.54
APTX-216ENST00000472896 PAPPA2Q9BXP8 1791 aa11.69□□□□□ -0.54
APTX-216ENST00000472896 A0A1B0GUL7 405 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 G3V3G9 751 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 APBB1O00213 710 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 ELL2O00472 640 aaPredicted RBP11.68□□□□□ -0.54
APTX-216ENST00000472896 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
APTX-216ENST00000472896 CTAGE5O15320 804 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 FKTNO75072 461 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 IVLP07476 585 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 USP17L8P0C7I0 530 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 LIG1P18858 919 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 ZSCAN26Q16670 478 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 NBPF9Q3BBW0 867 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 VPS53Q5VIR6 699 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 TRERF1Q96PN7 1200 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 TM6SF1Q9BZW5 370 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 CHPF2Q9P2E5 772 aa11.68□□□□□ -0.54
APTX-216ENST00000472896 PHLPP2Q6ZVD8 1323 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 USP27XA6NNY8 438 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 CLGNO14967 610 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 DSG3P32926 999 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 PTPN12Q05209 780 aaKnown RBP11.67□□□□□ -0.54
APTX-216ENST00000472896 ERCC6LQ2NKX8 1250 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 ARHGAP29Q52LW3 1261 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 SRLQ86TD4 932 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 CCDC191Q8NCU4 936 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 CCDC150Q8NCX0 1101 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 UBXN4Q92575 508 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 MYCBPQ99417 103 aaPredicted RBP11.67□□□□□ -0.54
APTX-216ENST00000472896 MEIS3Q99687 375 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 MXD3Q9BW11 206 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 OSBPL5Q9H0X9 879 aaPredicted RBP11.67□□□□□ -0.54
APTX-216ENST00000472896 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 ORC3Q9UBD5 711 aaPredicted RBP11.67□□□□□ -0.54
APTX-216ENST00000472896 GGA1Q9UJY5 639 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 GNAI2P04899 355 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
APTX-216ENST00000472896 IQCB1Q15051 598 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 NCAPGQ9BPX3 1015 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
APTX-216ENST00000472896 ZNF609O15014 1411 aa11.66□□□□□ -0.54
APTX-216ENST00000472896 SGSM2O43147 1006 aa11.66□□□□□ -0.54
APTX-216ENST00000472896 CFHR5Q9BXR6 569 aa11.66□□□□□ -0.54
APTX-216ENST00000472896 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
APTX-216ENST00000472896 VPS37CA5D8V6 355 aaPredicted RBP11.65□□□□□ -0.54
APTX-216ENST00000472896 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 TRIM28Q13263 835 aaKnown RBP11.65□□□□□ -0.54
APTX-216ENST00000472896 PRKG1Q13976 671 aa11.65□□□□□ -0.54
APTX-216ENST00000472896 CAMK4Q16566 473 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms