RNA–Protein interactions for RNA: ENST00000472476.5

TARDBP-204, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-204ENST00000472476 SPP2Q13103 211 aa17.78■□□□□ 0.44
TARDBP-204ENST00000472476 MTX1Q13505 466 aa17.78■□□□□ 0.44
TARDBP-204ENST00000472476 FAM110CQ1W6H9 321 aa17.78■□□□□ 0.44
TARDBP-204ENST00000472476 SPTY2D1Q68D10 685 aaPredicted RBP17.78■□□□□ 0.44
TARDBP-204ENST00000472476 SLF2Q8IX21 1173 aa17.78■□□□□ 0.44
TARDBP-204ENST00000472476 SMCR8Q8TEV9 937 aaPredicted RBP17.78■□□□□ 0.44
TARDBP-204ENST00000472476 DIS3LQ8TF46 1054 aaKnown RBP17.78■□□□□ 0.44
TARDBP-204ENST00000472476 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
TARDBP-204ENST00000472476 JAG1P78504 1218 aa17.77■□□□□ 0.44
TARDBP-204ENST00000472476 TRIM32Q13049 653 aa17.77■□□□□ 0.44
TARDBP-204ENST00000472476 ERICH6Q7L0X2 663 aa17.77■□□□□ 0.44
TARDBP-204ENST00000472476 PROCA1Q8NCQ7 364 aaPredicted RBP17.77■□□□□ 0.44
TARDBP-204ENST00000472476 PAWRQ96IZ0 340 aaKnown RBP17.77■□□□□ 0.44
TARDBP-204ENST00000472476 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
TARDBP-204ENST00000472476 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.44
TARDBP-204ENST00000472476 COL2A1P02458 1487 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-204ENST00000472476 MYO5AQ9Y4I1 1855 aaKnown RBP17.76■□□□□ 0.43
TARDBP-204ENST00000472476 CT47B1P0C2W7 299 aaPredicted RBP17.76■□□□□ 0.43
TARDBP-204ENST00000472476 CAP2P40123 477 aa17.76■□□□□ 0.43
TARDBP-204ENST00000472476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.76■□□□□ 0.43
TARDBP-204ENST00000472476 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
TARDBP-204ENST00000472476 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 EVI5O60447 810 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 CAPN2P17655 700 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 RARSP54136 660 aaKnown RBP17.75■□□□□ 0.43
TARDBP-204ENST00000472476 HMGCS2P54868 508 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 MVPQ14764 893 aaKnown RBP17.75■□□□□ 0.43
TARDBP-204ENST00000472476 SH3D19Q5HYK7 790 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 SPATA5Q8NB90 893 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 ZNF280CQ8ND82 737 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 COA7Q96BR5 231 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 ASCC2Q9H1I8 757 aaPredicted RBP17.75■□□□□ 0.43
TARDBP-204ENST00000472476 AKAP2Q9Y2D5 859 aa17.75■□□□□ 0.43
TARDBP-204ENST00000472476 PEX10O60683 326 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 ARID4AP29374 1257 aaPredicted RBP17.74■□□□□ 0.43
TARDBP-204ENST00000472476 MCAMP43121 646 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 POTEEQ6S8J3 1075 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 LRCH3Q96II8 777 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
TARDBP-204ENST00000472476 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
TARDBP-204ENST00000472476 A0A1W2PPC1 479 aa17.73■□□□□ 0.43
TARDBP-204ENST00000472476 MAP4K4O95819 1239 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-204ENST00000472476 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
TARDBP-204ENST00000472476 ARHGAP45Q92619 1136 aa17.73■□□□□ 0.43
TARDBP-204ENST00000472476 GDF15Q99988 308 aa17.73■□□□□ 0.43
TARDBP-204ENST00000472476 MORF4L1Q9UBU8 362 aa17.73■□□□□ 0.43
TARDBP-204ENST00000472476 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
TARDBP-204ENST00000472476 DNAH12Q6ZR08 3092 aa17.73■□□□□ 0.43
TARDBP-204ENST00000472476 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
TARDBP-204ENST00000472476 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
TARDBP-204ENST00000472476 USP17L5A8MUK1 530 aa17.72■□□□□ 0.43
TARDBP-204ENST00000472476 LDHCP07864 332 aa17.72■□□□□ 0.43
TARDBP-204ENST00000472476 GCLCP48506 637 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-204ENST00000472476 SH3RF3Q8TEJ3 882 aaPredicted RBP17.72■□□□□ 0.43
TARDBP-204ENST00000472476 DNAJC18Q9H819 358 aa17.72■□□□□ 0.43
TARDBP-204ENST00000472476 PNMA3Q9UL41 463 aa17.72■□□□□ 0.43
TARDBP-204ENST00000472476 DDX60LQ5H9U9 1706 aaKnown RBP17.72■□□□□ 0.43
TARDBP-204ENST00000472476 HMGCRP04035 888 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 GNAI3P08754 354 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 MAP3K21Q5TCX8 1036 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 ADGRA1Q86SQ6 560 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 METTL16Q86W50 562 aaKnown RBP17.71■□□□□ 0.43
TARDBP-204ENST00000472476 TRIB2Q92519 343 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 P2RX7Q99572 595 aaKnown RBP17.71■□□□□ 0.43
TARDBP-204ENST00000472476 WDR18Q9BV38 432 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 TXNRD2Q9NNW7 524 aa17.71■□□□□ 0.43
TARDBP-204ENST00000472476 RPTORQ8N122 1335 aa17.71■□□□□ 0.42
TARDBP-204ENST00000472476 HOXA7P31268 230 aaPredicted RBP17.7■□□□□ 0.42
TARDBP-204ENST00000472476 BMP8BP34820 402 aa17.7■□□□□ 0.42
TARDBP-204ENST00000472476 GSTO1P78417 241 aa17.7■□□□□ 0.42
TARDBP-204ENST00000472476 NECAB2Q7Z6G3 386 aa17.7■□□□□ 0.42
TARDBP-204ENST00000472476 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
TARDBP-204ENST00000472476 ANKLE1Q8NAG6 615 aa17.7■□□□□ 0.42
TARDBP-204ENST00000472476 RAI14Q9P0K7 980 aa17.7■□□□□ 0.42
TARDBP-204ENST00000472476 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
TARDBP-204ENST00000472476 LAMA2P24043 3122 aaKnown RBP17.7■□□□□ 0.42
TARDBP-204ENST00000472476 BACE1P56817 501 aa17.69■□□□□ 0.42
TARDBP-204ENST00000472476 Q3C1V9 767 aa17.69■□□□□ 0.42
TARDBP-204ENST00000472476 PI4KBQ9UBF8 816 aa17.69■□□□□ 0.42
TARDBP-204ENST00000472476 RBPJLQ9UBG7 517 aa17.69■□□□□ 0.42
TARDBP-204ENST00000472476 OGDHLQ9ULD0 1010 aa17.69■□□□□ 0.42
TARDBP-204ENST00000472476 TRIM27P14373 513 aa17.68■□□□□ 0.42
TARDBP-204ENST00000472476 PPP4CP60510 307 aa17.68■□□□□ 0.42
TARDBP-204ENST00000472476 MTMR2Q13614 643 aa17.68■□□□□ 0.42
TARDBP-204ENST00000472476 USP6NLQ92738 828 aa17.68■□□□□ 0.42
TARDBP-204ENST00000472476 SNRKQ9NRH2 765 aa17.68■□□□□ 0.42
TARDBP-204ENST00000472476 AATFQ9NY61 560 aaKnown RBP eCLIP17.68■□□□□ 0.42
TARDBP-204ENST00000472476 ZMYND8Q9ULU4 1186 aaPredicted RBP17.68■□□□□ 0.42
TARDBP-204ENST00000472476 CUL9Q8IWT3 2517 aa17.67■□□□□ 0.42
TARDBP-204ENST00000472476 PABPC4Q13310 644 aaKnown RBP eCLIP17.67■□□□□ 0.42
TARDBP-204ENST00000472476 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
TARDBP-204ENST00000472476 C7orf61Q8IZ16 206 aa17.67■□□□□ 0.42
TARDBP-204ENST00000472476 HMX1Q9NP08 348 aaPredicted RBP17.67■□□□□ 0.42
TARDBP-204ENST00000472476 LRP2BPQ9P2M1 347 aa17.67■□□□□ 0.42
TARDBP-204ENST00000472476 MAST2Q6P0Q8 1798 aa17.66■□□□□ 0.42
TARDBP-204ENST00000472476 CYP2E1P05181 493 aaPredicted RBP17.66■□□□□ 0.42
TARDBP-204ENST00000472476 CYP2B6P20813 491 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms