RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-208ENST00000471894 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
PUM1-208ENST00000471894 UPF3BQ9BZI7 483 aaKnown RBP12.47□□□□□ -0.41
PUM1-208ENST00000471894 KRT23Q9C075 422 aa12.47□□□□□ -0.41
PUM1-208ENST00000471894 CNNM2Q9H8M5 875 aa12.47□□□□□ -0.41
PUM1-208ENST00000471894 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
PUM1-208ENST00000471894 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
PUM1-208ENST00000471894 PI4KBQ9UBF8 816 aa12.47□□□□□ -0.41
PUM1-208ENST00000471894 LAMA4Q16363 1823 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 DDTLA6NHG4 134 aaPredicted RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 B4E1Z4 1266 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 PCP11498 1178 aaKnown RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 CPA1P15085 419 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 RASA3Q14644 834 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 USP50Q70EL3 339 aaPredicted RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 APOBEC3FQ8IUX4 373 aaKnown RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 FOXP4Q8IVH2 680 aaPredicted RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 CRACR2BQ8N4Y2 399 aaPredicted RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 TRIM34Q9BYJ4 488 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 MKNK2Q9HBH9 465 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 SCAF8Q9UPN6 1271 aaKnown RBP12.46□□□□□ -0.41
PUM1-208ENST00000471894 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
PUM1-208ENST00000471894 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 NEDD4P46934 1319 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 ST18O60284 1047 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 RANBP6O60518 1105 aaKnown RBP12.45□□□□□ -0.42
PUM1-208ENST00000471894 PRDM1O75626 825 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 FGRP09769 529 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 MCM5P33992 734 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 CDK8P49336 464 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 C16orf86Q6ZW13 317 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
PUM1-208ENST00000471894 ZNF444Q8N0Y2 327 aaPredicted RBP12.45□□□□□ -0.42
PUM1-208ENST00000471894 IL27Q8NEV9 243 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 ESR2Q92731 530 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 DCPSQ96C86 337 aaKnown RBP12.45□□□□□ -0.42
PUM1-208ENST00000471894 CSRNP1Q96S65 589 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 TMEM39BQ9GZU3 492 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
PUM1-208ENST00000471894 RRAGCQ9HB90 399 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 GGA3Q9NZ52 723 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 LAMB1P07942 1786 aa12.45□□□□□ -0.42
PUM1-208ENST00000471894 SCN4AP35499 1836 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 POLR2AP24928 1970 aaKnown RBP12.44□□□□□ -0.42
PUM1-208ENST00000471894 POTECB2RU33 542 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 ORC4O43929 436 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 KDM4AO75164 1064 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 FGD1P98174 961 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 EXOSC10Q01780 885 aaKnown RBP12.44□□□□□ -0.42
PUM1-208ENST00000471894 EAPPQ56P03 285 aaPredicted RBP12.44□□□□□ -0.42
PUM1-208ENST00000471894 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 PNMA8AQ86V59 439 aaPredicted RBP12.44□□□□□ -0.42
PUM1-208ENST00000471894 POTEDQ86YR6 584 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
PUM1-208ENST00000471894 SLC44A5Q8NCS7 719 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 EHD4Q9H223 541 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 ZSWIM5Q9P217 1185 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 SWAP70Q9UH65 585 aa12.44□□□□□ -0.42
PUM1-208ENST00000471894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.421e-12■□□□□ 9.3
PUM1-208ENST00000471894 ATRNL1Q5VV63 1379 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 PITPNM2Q9BZ72 1349 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 DDX60LQ5H9U9 1706 aaKnown RBP12.43□□□□□ -0.42
PUM1-208ENST00000471894 WDR90Q96KV7 1748 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
PUM1-208ENST00000471894 PRC1O43663 620 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
PUM1-208ENST00000471894 GABPAQ06546 454 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 COL9A3Q14050 684 aaPredicted RBP12.43□□□□□ -0.42
PUM1-208ENST00000471894 CYB5R4Q7L1T6 521 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 ZC3H15Q8WU90 426 aaKnown RBP12.43□□□□□ -0.42
PUM1-208ENST00000471894 TCEANC2Q96MN5 208 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
PUM1-208ENST00000471894 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 TFAP4Q01664 338 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 FAM47AQ5JRC9 791 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 Q6ZUG5 572 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 SULF1Q8IWU6 871 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 NKX2-3Q8TAU0 364 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
PUM1-208ENST00000471894 TTC14Q96N46 770 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 LRRC2Q9BYS8 371 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.42□□□□□ -0.42
PUM1-208ENST00000471894 HERC5Q9UII4 1024 aaKnown RBP12.42□□□□□ -0.42
PUM1-208ENST00000471894 TAOK2Q9UL54 1235 aa12.42□□□□□ -0.42
PUM1-208ENST00000471894 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 ERICH2A1L162 156 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 IFIT3O14879 490 aaKnown RBP12.41□□□□□ -0.42
PUM1-208ENST00000471894 TBC1D12O60347 775 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 TSPY3P0CV98 308 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 TSPY8P0CW00 308 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 RASA1P20936 1047 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 MCM2P49736 904 aa12.41□□□□□ -0.42
PUM1-208ENST00000471894 NT5C2P49902 561 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms