RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RFX5P48382 616 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-207ENST00000470763 RBL2Q08999 1139 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 RESP18Q5W5W9 173 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 UBE3BQ7Z3V4 1068 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 CTAGE6Q86UF2 777 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 CTAGE4Q8IX94 777 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 ACRBPQ8NEB7 543 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 MAN1B1Q9UKM7 699 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 M0R2C6 588 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 PPFIA4O75335 1185 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 ZNF18P17022 549 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 TIMM10P62072 90 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 PTPAQ15257 358 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 ZMYM1Q5SVZ6 1142 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 NCAPH2Q6IBW4 605 aa15.67■□□□□ 0.1
NPHP4-207ENST00000470763 UPF1Q92900 1129 aaKnown RBP eCLIP15.67■□□□□ 0.1
NPHP4-207ENST00000470763 GJD4Q96KN9 370 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-207ENST00000470763 HSP90AB3PQ58FF7 597 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 JMYQ8N9B5 988 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 MED15Q96RN5 788 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 RABEP2Q9H5N1 569 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 AKAP17AQ02040 695 aaKnown RBP15.66■□□□□ 0.1
NPHP4-207ENST00000470763 TADA2BQ86TJ2 420 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 AFAP1L1Q8TED9 768 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 ALG1Q9BT22 464 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 DDX21Q9NR30 783 aaKnown RBP eCLIP15.66■□□□□ 0.1
NPHP4-207ENST00000470763 SRCAPQ6ZRS2 3230 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 GLI3P10071 1580 aa15.66■□□□□ 0.1
NPHP4-207ENST00000470763 RNMTO43148 476 aaKnown RBP15.65■□□□□ 0.1
NPHP4-207ENST00000470763 MYO1BO43795 1136 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 AKAP4Q5JQC9 854 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 PDIA6Q15084 440 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 DNAJC21Q5F1R6 531 aaKnown RBP15.65■□□□□ 0.1
NPHP4-207ENST00000470763 ARHGEF25Q86VW2 580 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 EFCAB13Q8IY85 973 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 IGSF22Q8N9C0 903 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 XAGE3Q8WTP9 111 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 PHKBQ93100 1093 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 LIG3P49916 1009 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 SLC9C2Q5TAH2 1124 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 KRT40Q6A162 431 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 PPFIBP1Q86W92 1011 aa15.65■□□□□ 0.1
NPHP4-207ENST00000470763 MYH8P13535 1937 aa15.64■□□□□ 0.1
NPHP4-207ENST00000470763 NWD2Q9ULI1 1742 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 PPP6R2O75170 966 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 SYF2O95926 243 aaKnown RBP15.64■□□□□ 0.09
NPHP4-207ENST00000470763 GRIN1Q05586 938 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 NR1I3Q14994 352 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 GBP3Q9H0R5 595 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 MED4Q9NPJ6 270 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 UBE2Q2LH0YL09 131 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 STX17P56962 302 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 ANTXR2P58335 489 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 POSTNQ15063 836 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 KLHL10Q6JEL2 608 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 COPS6Q7L5N1 327 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 MSL3Q8N5Y2 521 aaKnown RBP15.64■□□□□ 0.09
NPHP4-207ENST00000470763 OSBP2Q969R2 916 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 MAP3K14Q99558 947 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 ACBD3Q9H3P7 528 aa15.64■□□□□ 0.09
NPHP4-207ENST00000470763 ATP5J2-PTCD1G3V325 749 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 PTCD1O75127 700 aaKnown RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 SLC39A6Q13433 755 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 C1orf141Q5JVX7 400 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 TTC39AQ5SRH9 613 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 MMS22LQ6ZRQ5 1243 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 PANX2Q96RD6 677 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 NAPGQ99747 312 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 HOOK1Q9UJC3 728 aaKnown RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 CASP14P31944 242 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 MDM2Q00987 491 aaPredicted RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 KAT2BQ92831 832 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 ENOX1Q8TC92 643 aaKnown RBP15.63■□□□□ 0.09
NPHP4-207ENST00000470763 ANKRD24Q8TF21 1146 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 SERTAD1Q9UHV2 236 aa15.63■□□□□ 0.09
NPHP4-207ENST00000470763 PHRF1Q9P1Y6 1649 aaKnown RBP15.62■□□□□ 0.09
NPHP4-207ENST00000470763 NRAPQ86VF7 1730 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 RNF113AO15541 343 aaKnown RBP15.62■□□□□ 0.09
NPHP4-207ENST00000470763 ZMYND10O75800 440 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 WASHC4Q2M389 1173 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 SEC31BQ9NQW1 1179 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 A0A1B0GTH6 734 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 CCT5P48643 541 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-207ENST00000470763 RASGRP2Q7LDG7 609 aa15.62■□□□□ 0.09
NPHP4-207ENST00000470763 GSPT2Q8IYD1 628 aaKnown RBP15.62■□□□□ 0.09
NPHP4-207ENST00000470763 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
NPHP4-207ENST00000470763 A0A087WUV0 522 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 PRPF6O94906 941 aaKnown RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 VPS72Q15906 364 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 IMMTQ16891 758 aaKnown RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 RALYLQ86SE5 291 aaKnown RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 MB21D2Q8IYB1 491 aaPredicted RBP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 BTG4Q9NY30 223 aa15.61■□□□□ 0.09
NPHP4-207ENST00000470763 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
NPHP4-207ENST00000470763 EHD4Q9H223 541 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms