RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 KIF5CO60282 957 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 RPS6KA5O75582 802 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 TMEM132AQ24JP5 1023 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 UBE3BQ7Z3V4 1068 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 BRMS1Q9HCU9 246 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 SAMM50Q9Y512 469 aa9.05□□□□□ -0.96
TPM3-215ENST00000469717 NALCNQ8IZF0 1738 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 CEMIPQ8WUJ3 1361 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 PPFIA4O75335 1185 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 FXR1P51114 621 aaKnown RBP eCLIP9.04□□□□□ -0.96
TPM3-215ENST00000469717 KBTBD3Q8NAB2 608 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 FAM71BQ8TC56 605 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 ZNF274Q96GC6 653 aaPredicted RBP9.04□□□□□ -0.96
TPM3-215ENST00000469717 CAPZA3Q96KX2 299 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 KAT14Q9H8E8 782 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 KCNH3Q9ULD8 1083 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 PRC1O43663 620 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 ERLIN1O75477 346 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 PRPF6O94906 941 aaKnown RBP9.04□□□□□ -0.96
TPM3-215ENST00000469717 ZNF18P17022 549 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 CASP14P31944 242 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 MNAT1P51948 309 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 PTPAQ15257 358 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 MMS22LQ6ZRQ5 1243 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 AFAP1L1Q8TED9 768 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 HAUS7Q99871 368 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.04□□□□□ -0.96
TPM3-215ENST00000469717 GOLGA6L9A6NEM1 432 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 FOXP2O15409 715 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 KCNA4P22459 653 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 GGCXP38435 758 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 ANTXR2P58335 489 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 OSBP2Q969R2 916 aa9.04□□□□□ -0.96
TPM3-215ENST00000469717 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
TPM3-215ENST00000469717 CTAGE15A4D2H0 777 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 CTAGE9A4FU28 777 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 AKR1B15C9JRZ8 316 aaPredicted RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 CTAGE8P0CG41 777 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 MCTP2Q6DN12 878 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 CTAGE6Q86UF2 777 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 CTAGE4Q8IX94 777 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 CXorf56Q9H5V9 222 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 MKRN1Q9UHC7 482 aaKnown RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 NEURL1BA8MQ27 555 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 POLR2DO15514 142 aaKnown RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 GCP02774 474 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 CCT6AP40227 531 aaKnown RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 CEP112Q8N8E3 955 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 SLF1Q9BQI6 1058 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 ALG1Q9BT22 464 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 PAG1Q9NWQ8 432 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 ERLIN2O94905 339 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 HNRNPH1P31943 449 aaKnown RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
TPM3-215ENST00000469717 ERVK-24P63145 666 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 KRT40Q6A162 431 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 INCENPQ9NQS7 918 aa9.03□□□□□ -0.96
TPM3-215ENST00000469717 GCKRQ14397 625 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 NR1I3Q14994 352 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 RESP18Q5W5W9 173 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 EFCAB13Q8IY85 973 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 CCDC82Q8N4S0 544 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 ANKRD24Q8TF21 1146 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 STAMQ92783 540 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 ACSBG1Q96GR2 724 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 PSMD1Q99460 953 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 MAP3K14Q99558 947 aa9.02□□□□□ -0.96
TPM3-215ENST00000469717 ECM2O94769 699 aaPredicted RBP9.02□□□□□ -0.97
TPM3-215ENST00000469717 CD44P16070 742 aaKnown RBP9.02□□□□□ -0.97
TPM3-215ENST00000469717 CABP4P57796 275 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 MDM2Q00987 491 aaPredicted RBP9.02□□□□□ -0.97
TPM3-215ENST00000469717 PDIA6Q15084 440 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 APTXQ7Z2E3 356 aaKnown RBP9.02□□□□□ -0.97
TPM3-215ENST00000469717 BRAPQ7Z569 592 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 MICU3Q86XE3 530 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 SMARCC1Q92922 1105 aaPredicted RBP9.02□□□□□ -0.97
TPM3-215ENST00000469717 MMS19Q96T76 1030 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 NBPF3Q9H094 633 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 HPCAL4Q9UM19 191 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 GUCA1BQ9UMX6 200 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 FAM169AQ9Y6X4 670 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 CDHR2Q9BYE9 1310 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 MYO1FO00160 1098 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 FKBP4Q02790 459 aaKnown RBP eCLIP9.02□□□□□ -0.97
TPM3-215ENST00000469717 PI16Q6UXB8 463 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 COPS6Q7L5N1 327 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 ZNF594Q96JF6 807 aaPredicted RBP9.02□□□□□ -0.97
TPM3-215ENST00000469717 AGPSO00116 658 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 GYPCP04921 128 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 ARHGAP25P42331 645 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 AFMP43652 599 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 POSTNQ15063 836 aa9.02□□□□□ -0.97
TPM3-215ENST00000469717 CCDC85AQ96PX6 553 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms