RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 CFAP100Q494V2 611 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 CREBRFQ8IUR6 639 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 TMX1Q9H3N1 280 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 AKAP11Q9UKA4 1901 aa20.55■□□□□ 0.88
MCF2L-221ENST00000469415 TOB1P50616 345 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-221ENST00000469415 NGLY1Q96IV0 654 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 PRDX5P30044 214 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 AFMP43652 599 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-221ENST00000469415 NBPF11Q86T75 865 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 FAM177A1Q8N128 213 aaPredicted RBP20.54■□□□□ 0.88
MCF2L-221ENST00000469415 JMYQ8N9B5 988 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 MRFAP1L1Q96HT8 127 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 CNNM2Q9H8M5 875 aa20.54■□□□□ 0.88
MCF2L-221ENST00000469415 CAVIN2O95810 425 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 NLRP12P59046 1061 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 KLHL10Q6JEL2 608 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 TXNRD3Q86VQ6 643 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 SGMS1Q86VZ5 419 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 MAP3K14Q99558 947 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 PRR29P0C7W0 189 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 METTL16Q86W50 562 aaKnown RBP20.53■□□□□ 0.88
MCF2L-221ENST00000469415 NBPF5PQ86XG9 351 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-221ENST00000469415 GNL3LQ9NVN8 582 aaKnown RBP20.53■□□□□ 0.88
MCF2L-221ENST00000469415 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 DISP2A7MBM2 1401 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 STRCQ7RTU9 1775 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 GNPATO15228 680 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 FMNL1O95466 1100 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-221ENST00000469415 LIFRP42702 1097 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 CBX1P83916 185 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 EARS2Q5JPH6 523 aaKnown RBP20.53■□□□□ 0.88
MCF2L-221ENST00000469415 FAM84BQ96KN1 310 aaPredicted RBP20.53■□□□□ 0.88
MCF2L-221ENST00000469415 FANCLQ9NW38 375 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 SERTAD1Q9UHV2 236 aa20.53■□□□□ 0.88
MCF2L-221ENST00000469415 ITGB4P16144 1822 aa20.52■□□□□ 0.88
MCF2L-221ENST00000469415 CRACR2BQ8N4Y2 399 aaPredicted RBP20.52■□□□□ 0.88
MCF2L-221ENST00000469415 IFNAR1P17181 557 aa20.52■□□□□ 0.88
MCF2L-221ENST00000469415 FANCCQ00597 558 aa20.52■□□□□ 0.88
MCF2L-221ENST00000469415 PDE4BQ07343 736 aa20.52■□□□□ 0.88
MCF2L-221ENST00000469415 IFIT1BQ5T764 474 aaKnown RBP20.52■□□□□ 0.88
MCF2L-221ENST00000469415 TICAM2Q86XR7 235 aa20.52■□□□□ 0.88
MCF2L-221ENST00000469415 TMEM232C9JQI7 657 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 MMP1P03956 469 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 VEGFAP15692 232 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-221ENST00000469415 CEP135Q66GS9 1140 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 AMIGO3Q86WK7 504 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 KRI1Q8N9T8 703 aaKnown RBP20.51■□□□□ 0.87
MCF2L-221ENST00000469415 ZNF384Q8TF68 577 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 ESR2Q92731 530 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 PTPN14Q15678 1187 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 ALX1Q15699 326 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 SARM1Q6SZW1 724 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 ENAHQ8N8S7 591 aaPredicted RBP20.51■□□□□ 0.87
MCF2L-221ENST00000469415 ZNF174Q15697 407 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 PPP4R3BQ5MIZ7 849 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 CCDC112Q8NEF3 446 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 STAG1Q8WVM7 1258 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 DHX58Q96C10 678 aa20.51■□□□□ 0.87
MCF2L-221ENST00000469415 WNT7AO00755 349 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 STX17P56962 302 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 UBASH3AP57075 661 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 CCZ1BP86790 482 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 CCZ1P86791 482 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-221ENST00000469415 NCAPHQ15003 741 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 NUP98P52948 1817 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 U2AF2P26368 475 aaKnown RBP eCLIP20.5■□□□□ 0.87
MCF2L-221ENST00000469415 TPM4P67936 248 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 EP400Q96L91 3159 aa20.5■□□□□ 0.87
MCF2L-221ENST00000469415 PAPPAQ13219 1627 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 CDK11BP21127 795 aaKnown RBP20.49■□□□□ 0.87
MCF2L-221ENST00000469415 SFPQP23246 707 aaKnown RBP eCLIP20.49■□□□□ 0.87
MCF2L-221ENST00000469415 ARMCX5Q6P1M9 558 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 EPSTI1Q96J88 318 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 WDR19Q8NEZ3 1342 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 KRBA2Q6ZNG9 492 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 SHISA4Q96DD7 197 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 RNF41Q9H4P4 317 aaPredicted RBP20.49■□□□□ 0.87
MCF2L-221ENST00000469415 COL4A1P02462 1669 aa20.49■□□□□ 0.87
MCF2L-221ENST00000469415 GNAT2P19087 354 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 MECOMQ03112 1051 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 SMYD4Q8IYR2 804 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-221ENST00000469415 SETDB2Q96T68 719 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 CSRNP2Q9H175 543 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 TAF1P21675 1872 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 LRP6O75581 1613 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 BMP6P22004 513 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 CDC25AP30304 524 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 RPS8P62241 208 aaKnown RBP20.48■□□□□ 0.87
MCF2L-221ENST00000469415 DEXIO95424 95 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 RESP18Q5W5W9 173 aa20.48■□□□□ 0.87
MCF2L-221ENST00000469415 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-221ENST00000469415 HOMER1Q86YM7 354 aa20.47■□□□□ 0.87
MCF2L-221ENST00000469415 NLRP3Q96P20 1036 aa20.47■□□□□ 0.87
MCF2L-221ENST00000469415 RIOK1Q9BRS2 568 aaKnown RBP20.47■□□□□ 0.87
MCF2L-221ENST00000469415 ANKIB1Q9P2G1 1089 aa20.47■□□□□ 0.87
MCF2L-221ENST00000469415 ZPR1O75312 459 aa20.47■□□□□ 0.87
MCF2L-221ENST00000469415 ADAMTS3O15072 1205 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms