RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 USP17L12C9JPN9 530 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 USP17L21D6R901 530 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 UQCRFS1P1P0C7P4 283 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 PRDX5P30044 214 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 ADD2P35612 726 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 SSR1P43307 286 aaKnown RBP14.11□□□□□ -0.15
USP11-206ENST00000469080 UVSSAQ2YD98 709 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 PLIN2Q99541 437 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 MCM9Q9NXL9 1143 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 NRBP1Q9UHY1 535 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 NEDD4P46934 1319 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
USP11-206ENST00000469080 INTS5Q6P9B9 1019 aaKnown RBP14.11□□□□□ -0.15
USP11-206ENST00000469080 CCDC186Q7Z3E2 898 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 TSPY2A6NKD2 308 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 CLSTN1O94985 981 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 RBM5P52756 815 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP11-206ENST00000469080 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
USP11-206ENST00000469080 MRVI1Q9Y6F6 885 aa14.11□□□□□ -0.15
USP11-206ENST00000469080 CTDNEP1O95476 244 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 CYP2D6P10635 497 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 CALRP27797 417 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 LRMPQ12912 555 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 TRIM22Q8IYM9 498 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 CPVLQ9H3G5 476 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 ANGEL1Q9UNK9 670 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 MED23Q9ULK4 1368 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 TPM3P06753 285 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 EIF5P55010 431 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 AOPEPQ8N6M6 819 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 MED4Q9NPJ6 270 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 H0YHG0 523 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 RPS8P62241 208 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 SARNPP82979 210 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 SSRP1Q08945 709 aaKnown RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
USP11-206ENST00000469080 CEP135Q66GS9 1140 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 TPTE2Q6XPS3 522 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 VPS54Q9P1Q0 977 aa14.1□□□□□ -0.15
USP11-206ENST00000469080 BTBD18B2RXH4 712 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 LMOD1P29536 600 aaPredicted RBP14.09□□□□□ -0.15
USP11-206ENST00000469080 CDC27P30260 824 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 MNAT1P51948 309 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 CPDO75976 1380 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 PFKFB2O60825 505 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 AFMP43652 599 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 CIAO1O76071 339 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 NR5A1Q13285 461 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 MCTP2Q6DN12 878 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 TXNRD3Q86VQ6 643 aa14.09□□□□□ -0.15
USP11-206ENST00000469080 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.15
USP11-206ENST00000469080 RTN1Q16799 776 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 KRT40Q6A162 431 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 MAPKAPK5Q8IW41 473 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
USP11-206ENST00000469080 CBX8Q9HC52 389 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 CABP5Q9NP86 173 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 V9GY48 417 aaPredicted RBP14.08□□□□□ -0.16
USP11-206ENST00000469080 SPTLC2O15270 562 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 GUCY1A2P33402 732 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 ZNF827Q17R98 1081 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 TRAPPC3LQ5T215 181 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 OLFM4Q6UX06 510 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
USP11-206ENST00000469080 MARF1Q9Y4F3 1742 aaKnown RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 CAMTA2O94983 1202 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 EEF2KMTQ96G04 330 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 STRBPQ96SI9 672 aaKnown RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 CSF1RP07333 972 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 ANTXR2P58335 489 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 SKIDA1Q1XH10 827 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 IFIT1BQ5T764 474 aaKnown RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 GPIHBP1Q8IV16 184 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 DYNLL2Q96FJ2 89 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 GOLGA8HP0CJ92 632 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 HIBADHP31937 336 aaKnown RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 NDUFA8P51970 172 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 SMARCC1Q92922 1105 aaPredicted RBP14.07□□□□□ -0.16
USP11-206ENST00000469080 FBXO3Q9UK99 471 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 PCDHA7Q9UN72 937 aa14.07□□□□□ -0.16
USP11-206ENST00000469080 CCDC189A1A4V9 331 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 MAGEA9P43362 315 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 TSGA10IPQ3SY00 556 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 TTC19Q6DKK2 380 aaPredicted RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 LEKR1Q6ZMV7 388 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 ZSCAN29Q8IWY8 852 aaPredicted RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 GRAMD1CQ8IYS0 662 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 SLC24A3Q9HC58 644 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 CLIP2Q9UDT6 1046 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 PPP1R12AO14974 1030 aaPredicted RBP14.06□□□□□ -0.16
USP11-206ENST00000469080 CDC25AP30304 524 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 RESTQ13127 1097 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 ARID5BQ14865 1188 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 APOA5Q6Q788 366 aa14.06□□□□□ -0.16
USP11-206ENST00000469080 ADGRA1Q86SQ6 560 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms