RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TRPA1O75762 1119 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 MBD4O95243 580 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 UBE3CQ15386 1083 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 SLC4A8Q2Y0W8 1093 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 B4GALNT3Q6L9W6 998 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 ZSCAN25Q6NSZ9 544 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 SCYL3Q8IZE3 742 aa15.59■□□□□ 0.09
COL5A1-206ENST00000465877 CRNKL1Q9BZJ0 848 aaKnown RBP15.59■□□□□ 0.09
COL5A1-206ENST00000465877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.59■□□□□ 0.09
COL5A1-206ENST00000465877 SAP30BPQ9UHR5 308 aaKnown RBP15.59■□□□□ 0.09
COL5A1-206ENST00000465877 HERC5Q9UII4 1024 aaKnown RBP15.59■□□□□ 0.09
COL5A1-206ENST00000465877 IGF2BP3O00425 579 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL5A1-206ENST00000465877 COL13A1Q5TAT6 717 aaPredicted RBP15.58■□□□□ 0.08
COL5A1-206ENST00000465877 DNAJC18Q9H819 358 aa15.58■□□□□ 0.08
COL5A1-206ENST00000465877 ARMT1Q9H993 441 aa15.58■□□□□ 0.08
COL5A1-206ENST00000465877 PI4KBQ9UBF8 816 aa15.58■□□□□ 0.08
COL5A1-206ENST00000465877 PALD1Q9ULE6 856 aa15.58■□□□□ 0.08
COL5A1-206ENST00000465877 ZSWIM8A7E2V4 1837 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 CCL15-CCL14A0A0B4J2E2 113 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 IRF6O14896 467 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 HLA-DOAP06340 250 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 GTF2A2P52657 109 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 PDE1AP54750 535 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 INHBEP58166 350 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 PPATQ06203 517 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 CCL15Q16663 113 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 IFNL1Q8IU54 200 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 CRACR2BQ8N4Y2 399 aaPredicted RBP15.57■□□□□ 0.08
COL5A1-206ENST00000465877 SDR42E1Q8WUS8 393 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 MS4A4AQ96JQ5 239 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 PICK1Q9NRD5 415 aa15.57■□□□□ 0.08
COL5A1-206ENST00000465877 TESPA1A2RU30 521 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-206ENST00000465877 CTNND1O60716 968 aaKnown RBP15.56■□□□□ 0.08
COL5A1-206ENST00000465877 NUCB1Q02818 461 aa15.56■□□□□ 0.08
COL5A1-206ENST00000465877 CHD1LQ86WJ1 897 aa15.56■□□□□ 0.08
COL5A1-206ENST00000465877 BRI3BPQ8WY22 251 aa15.56■□□□□ 0.08
COL5A1-206ENST00000465877 FSD1Q9BTV5 496 aa15.56■□□□□ 0.08
COL5A1-206ENST00000465877 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-206ENST00000465877 STAP2Q9UGK3 403 aa15.56■□□□□ 0.08
COL5A1-206ENST00000465877 LAMA4Q16363 1823 aa15.56■□□□□ 0.08
COL5A1-206ENST00000465877 GREB1LQ9C091 1923 aaPredicted RBP15.56■□□□□ 0.08
COL5A1-206ENST00000465877 HTTP42858 3142 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 ALDH1A1P00352 501 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 SNAPC2Q13487 334 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 METTL16Q86W50 562 aaKnown RBP15.55■□□□□ 0.08
COL5A1-206ENST00000465877 APPBP2Q92624 585 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 CFHR5Q9BXR6 569 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 TRIM34Q9BYJ4 488 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 PUS7LQ9H0K6 701 aaKnown RBP15.55■□□□□ 0.08
COL5A1-206ENST00000465877 EHD4Q9H223 541 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 DCP1AQ9NPI6 582 aaPredicted RBP15.55■□□□□ 0.08
COL5A1-206ENST00000465877 KCNH4Q9UQ05 1017 aa15.55■□□□□ 0.08
COL5A1-206ENST00000465877 RNF113AO15541 343 aaKnown RBP15.54■□□□□ 0.08
COL5A1-206ENST00000465877 ZFYP08048 801 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-206ENST00000465877 CETPP11597 493 aa15.54■□□□□ 0.08
COL5A1-206ENST00000465877 PTPRAP18433 802 aa15.54■□□□□ 0.08
COL5A1-206ENST00000465877 RRP1BQ14684 758 aaKnown RBP15.54■□□□□ 0.08
COL5A1-206ENST00000465877 LRRFIP1Q32MZ4 808 aaKnown RBP15.54■□□□□ 0.08
COL5A1-206ENST00000465877 PTPN18Q99952 460 aa15.54■□□□□ 0.08
COL5A1-206ENST00000465877 MGAMO43451 1857 aa15.54■□□□□ 0.08
COL5A1-206ENST00000465877 PRKAB2O43741 272 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 CAP2P40123 477 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 OTUD7BQ6GQQ9 843 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 TTC6Q86TZ1 520 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 CCDC84Q86UT8 332 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-206ENST00000465877 FAM43AQ8N2R8 423 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 ATP8A2Q9NTI2 1148 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 MCM9Q9NXL9 1143 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 SERPINB13Q9UIV8 391 aa15.53■□□□□ 0.08
COL5A1-206ENST00000465877 M0R2C6 588 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 GPAA1O43292 621 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 GDF11O95390 407 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 POLR3DP05423 398 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-206ENST00000465877 PLCD1P51178 756 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 EVX2Q03828 476 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 CRHR2Q13324 411 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 FOXP4Q8IVH2 680 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-206ENST00000465877 OSBP2Q969R2 916 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 SLC4A4Q9Y6R1 1079 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 ZHX2Q9Y6X8 837 aa15.52■□□□□ 0.08
COL5A1-206ENST00000465877 A0A0G2JLL6 359 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-206ENST00000465877 ASNSP08243 561 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 SHROOM1Q2M3G4 852 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-206ENST00000465877 NOM1Q5C9Z4 860 aaKnown RBP15.51■□□□□ 0.07
COL5A1-206ENST00000465877 PRRT2Q7Z6L0 340 aaPredicted RBP15.51■□□□□ 0.07
COL5A1-206ENST00000465877 TNS4Q8IZW8 715 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 EVI5LQ96CN4 794 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 R3HDMLQ9H3Y0 253 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
COL5A1-206ENST00000465877 ZBTB21Q9ULJ3 1066 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 AFG3L2Q9Y4W6 797 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 CENPFP49454 3210 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 MYH4Q9Y623 1939 aa15.51■□□□□ 0.07
COL5A1-206ENST00000465877 PARP14Q460N5 1801 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 TRIM75PA6NK02 468 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 BTBD19C9JJ37 291 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 GPR25O00155 361 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 CYP2D6P10635 497 aa15.5■□□□□ 0.07
COL5A1-206ENST00000465877 GABPAQ06546 454 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms