RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 RBL2Q08999 1139 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 INPP5AQ14642 412 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 DUOXA2Q1HG44 320 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 SNAP47Q5SQN1 464 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 LRFN4Q6PJG9 635 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 REC114Q7Z4M0 266 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 MCF2L2Q86YR7 1114 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 ZDHHC13Q8IUH4 622 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 RBBP8NLQ8NC74 664 aaPredicted RBP3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 ARMC5Q96C12 935 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 USP26Q9BXU7 913 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 ZC3H12CQ9C0D7 883 aaKnown RBP3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 RNF208Q9H0X6 261 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 CBX8Q9HC52 389 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 DISC1Q9NRI5 854 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 GINM1Q9NU53 330 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 CRIM1Q9NZV1 1036 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 PPP1R9AQ9ULJ8 1098 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 INPP5FQ9Y2H2 1132 aa3.1□□□□□ -1.91
NUCKS1-202ENST00000464938 TMPRSS2O15393 492 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 SLFN14P0C7P3 912 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 ARID5AQ03989 594 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 SOX4Q06945 474 aaPredicted RBP3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 APOBRQ0VD83 1088 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 GNL2Q13823 731 aaKnown RBP3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 TMEM201Q5SNT2 666 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 ANKRD34AQ69YU3 496 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 SREK1Q8WXA9 508 aaKnown RBP3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 JARID2Q92833 1246 aaPredicted RBP3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 NKD1Q969G9 470 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 PLPPR2Q96GM1 343 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 FAM46AQ96IP4 442 aaKnown RBP3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 RUSC1Q9BVN2 902 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 PCDHA4Q9UN74 947 aa3.09□□□□□ -1.91
NUCKS1-202ENST00000464938 PRR19A6NJB7 356 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 FANCGO15287 622 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 TLR3O15455 904 aaKnown RBP3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 GSC2O15499 205 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 IGSF3O75054 1194 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 ALX3O95076 343 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 IGLV1-40P01703 118 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 ADH5P11766 374 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 CAP2P40123 477 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 ID3Q02535 119 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 CLCQ05315 142 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 PDE3AQ14432 1141 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 CWF19L2Q2TBE0 894 aaKnown RBP3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 SEZ6Q53EL9 994 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 OGFOD2Q6N063 350 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 ACAD11Q709F0 780 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 HDXQ7Z353 690 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 VPS37DQ86XT2 251 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 POU5F2Q8N7G0 328 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 C2CD4AQ8NCU7 369 aaPredicted RBP3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 DRC1Q96MC2 740 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 FANCD2OSQ96PS1 177 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 UBL7Q96S82 380 aaPredicted RBP3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 WNT10AQ9GZT5 417 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 AKTIPQ9H8T0 292 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 BRMS1Q9HCU9 246 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 PRKAG2Q9UGJ0 569 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 STRIP2Q9ULQ0 834 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 ZNRF3Q9ULT6 936 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 EFR3BQ9Y2G0 817 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 HIF3AQ9Y2N7 669 aa3.08□□□□□ -1.92
NUCKS1-202ENST00000464938 MEIS3P2A8K0S8 358 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 NEFMP07197 916 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 C8AP07357 584 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 DRD2P14416 443 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 LMNB1P20700 586 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 PREPP48147 710 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 GIPRP48546 466 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 NASPP49321 788 aaPredicted RBP3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 ZNF165P49910 485 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 HNRNPUQ00839 825 aaKnown RBP eCLIP3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 SF3A1Q15459 793 aaKnown RBP3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 WIPI1Q5MNZ9 446 aaPredicted RBP3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 ZBTB37Q5TC79 503 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 NUTM2GQ5VZR2 741 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 SEZ6L2Q6UXD5 910 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 CBLL1Q75N03 491 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 C12orf40Q86WS4 652 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 ARMC10Q8N2F6 343 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 AGGF1Q8N302 714 aaeCLIP3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 RNF214Q8ND24 703 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 EZH1Q92800 747 aaPredicted RBP3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 SHDQ96IW2 340 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 ACSS3Q9H6R3 686 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 CYP4F12Q9HCS2 524 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 ADAM30Q9UKF2 790 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 RAXQ9Y2V3 346 aa3.07□□□□□ -1.92
NUCKS1-202ENST00000464938 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 DCDC2CA8MYV0 355 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 DNAJA2O60884 412 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 HTR3BO95264 441 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 BPNT1O95861 308 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 IMPDH2P12268 514 aa3.06□□□□□ -1.92
NUCKS1-202ENST00000464938 DNAJA1P31689 397 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms