RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 OTOFQ9HC10 1997 aa31.5■■■□□ 2.63
SURF1-203ENST00000463965 PHF20L1A8MW92 1017 aa31.5■■■□□ 2.63
SURF1-203ENST00000463965 CTNND1O60716 968 aaKnown RBP31.5■■■□□ 2.63
SURF1-203ENST00000463965 TM4SF4P48230 202 aa31.5■■■□□ 2.63
SURF1-203ENST00000463965 DDRGK1Q96HY6 314 aa31.5■■■□□ 2.63
SURF1-203ENST00000463965 PLEKHM2Q8IWE5 1019 aa31.49■■■□□ 2.63
SURF1-203ENST00000463965 FOCADQ5VW36 1801 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 CHGBP05060 677 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 POLR3DP05423 398 aaPredicted RBP31.48■■■□□ 2.63
SURF1-203ENST00000463965 GJA5P36382 358 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 PPATQ06203 517 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 SCYL3Q8IZE3 742 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 CNKSR2Q8WXI2 1034 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 PUS7LQ9H0K6 701 aaKnown RBP31.48■■■□□ 2.63
SURF1-203ENST00000463965 OSBPL3Q9H4L5 887 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 ATP8A2Q9NTI2 1148 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 CDK5RAP2Q96SN8 1893 aa31.48■■■□□ 2.63
SURF1-203ENST00000463965 GTF2A2P52657 109 aa31.47■■■□□ 2.63
SURF1-203ENST00000463965 PPIL2Q13356 520 aa31.47■■■□□ 2.63
SURF1-203ENST00000463965 SDR42E1Q8WUS8 393 aa31.47■■■□□ 2.63
SURF1-203ENST00000463965 MCM9Q9NXL9 1143 aa31.47■■■□□ 2.63
SURF1-203ENST00000463965 SAGE1Q9NXZ1 904 aa31.47■■■□□ 2.63
SURF1-203ENST00000463965 FAM196BA6NMK8 535 aa31.46■■■□□ 2.63
SURF1-203ENST00000463965 TRIM6-TRIM34B2RNG4 842 aa31.46■■■□□ 2.63
SURF1-203ENST00000463965 SLC4A4Q9Y6R1 1079 aa31.46■■■□□ 2.63
SURF1-203ENST00000463965 SLURP2P0DP57 97 aa31.45■■■□□ 2.63
SURF1-203ENST00000463965 SLC4A8Q2Y0W8 1093 aa31.45■■■□□ 2.63
SURF1-203ENST00000463965 OTUD7BQ6GQQ9 843 aa31.45■■■□□ 2.63
SURF1-203ENST00000463965 METTL16Q86W50 562 aaKnown RBP31.45■■■□□ 2.63
SURF1-203ENST00000463965 AMOTL1Q8IY63 956 aa31.45■■■□□ 2.63
SURF1-203ENST00000463965 OSBP2Q969R2 916 aa31.45■■■□□ 2.63
SURF1-203ENST00000463965 DCP1AQ9NPI6 582 aaPredicted RBP31.45■■■□□ 2.63
SURF1-203ENST00000463965 RNF186Q9NXI6 227 aa31.45■■■□□ 2.63
SURF1-203ENST00000463965 TRPA1O75762 1119 aa31.44■■■□□ 2.62
SURF1-203ENST00000463965 TICAM2Q86XR7 235 aa31.44■■■□□ 2.62
SURF1-203ENST00000463965 EHD4Q9H223 541 aa31.44■■■□□ 2.62
SURF1-203ENST00000463965 SERPINB13Q9UIV8 391 aa31.44■■■□□ 2.62
SURF1-203ENST00000463965 PRKAB2O43741 272 aa31.43■■■□□ 2.62
SURF1-203ENST00000463965 ALDH1A1P00352 501 aa31.43■■■□□ 2.62
SURF1-203ENST00000463965 SNAPC2Q13487 334 aa31.43■■■□□ 2.62
SURF1-203ENST00000463965 STRBPQ96SI9 672 aaKnown RBP31.43■■■□□ 2.62
SURF1-203ENST00000463965 MYH1P12882 1939 aa31.43■■■□□ 2.62
SURF1-203ENST00000463965 IRF6O14896 467 aa31.42■■■□□ 2.62
SURF1-203ENST00000463965 HSPA8P11142 646 aaKnown RBP31.42■■■□□ 2.62
SURF1-203ENST00000463965 GNAT2P19087 354 aa31.42■■■□□ 2.62
SURF1-203ENST00000463965 CAP2P40123 477 aa31.42■■■□□ 2.62
SURF1-203ENST00000463965 RILPL2Q969X0 211 aa31.42■■■□□ 2.62
SURF1-203ENST00000463965 CETPP11597 493 aa31.41■■■□□ 2.62
SURF1-203ENST00000463965 LBX1P52954 281 aa31.41■■■□□ 2.62
SURF1-203ENST00000463965 IFNL1Q8IU54 200 aa31.41■■■□□ 2.62
SURF1-203ENST00000463965 CCL15-CCL14A0A0B4J2E2 113 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 TESPA1A2RU30 521 aaPredicted RBP31.4■■■□□ 2.62
SURF1-203ENST00000463965 GPAA1O43292 621 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 PTPRAP18433 802 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 CCL15Q16663 113 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 ZMYM1Q5SVZ6 1142 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 MS4A4AQ96JQ5 239 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 TSKSQ9UJT2 592 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 ZHX2Q9Y6X8 837 aa31.4■■■□□ 2.62
SURF1-203ENST00000463965 PLCD1P51178 756 aa31.39■■■□□ 2.62
SURF1-203ENST00000463965 PRDM10Q9NQV6 1147 aa31.39■■■□□ 2.62
SURF1-203ENST00000463965 GINM1Q9NU53 330 aa31.39■■■□□ 2.62
SURF1-203ENST00000463965 M0R2C6 588 aa31.38■■■□□ 2.61
SURF1-203ENST00000463965 TBC1D2Q9BYX2 928 aa31.38■■■□□ 2.61
SURF1-203ENST00000463965 DNAJC18Q9H819 358 aa31.38■■■□□ 2.61
SURF1-203ENST00000463965 TAOK2Q9UL54 1235 aa31.38■■■□□ 2.61
SURF1-203ENST00000463965 CXCL11O14625 94 aa31.37■■■□□ 2.61
SURF1-203ENST00000463965 ASNSP08243 561 aa31.37■■■□□ 2.61
SURF1-203ENST00000463965 GIMAP6Q6P9H5 292 aa31.37■■■□□ 2.61
SURF1-203ENST00000463965 CENPQQ7L2Z9 268 aaPredicted RBP31.37■■■□□ 2.61
SURF1-203ENST00000463965 KCNH4Q9UQ05 1017 aa31.37■■■□□ 2.61
SURF1-203ENST00000463965 NAV1Q8NEY1 1877 aa31.37■■■□□ 2.61
SURF1-203ENST00000463965 APPP05067 770 aa31.36■■■□□ 2.61
SURF1-203ENST00000463965 PDE4AP27815 886 aa31.36■■■□□ 2.61
SURF1-203ENST00000463965 BRI3BPQ8WY22 251 aa31.36■■■□□ 2.61
SURF1-203ENST00000463965 IGF2BP3O00425 579 aaKnown RBP eCLIP31.35■■■□□ 2.61
SURF1-203ENST00000463965 NACAP1Q9BZK3 213 aa31.35■■■□□ 2.61
SURF1-203ENST00000463965 HELLSQ9NRZ9 838 aa31.35■■■□□ 2.61
SURF1-203ENST00000463965 ARPP21Q9UBL0 812 aaPredicted RBP31.35■■■□□ 2.61
SURF1-203ENST00000463965 DOCK1Q14185 1865 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 SIPA1L1O43166 1804 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 USP17L5A8MUK1 530 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 USP17L12C9JPN9 530 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 USP17L21D6R901 530 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 RRP1BQ14684 758 aaKnown RBP31.34■■■□□ 2.61
SURF1-203ENST00000463965 CERKLQ49MI3 558 aaPredicted RBP31.34■■■□□ 2.61
SURF1-203ENST00000463965 IFFO2Q5TF58 517 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 TATDN1Q6P1N9 297 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 SEC62Q99442 399 aaKnown RBP31.34■■■□□ 2.61
SURF1-203ENST00000463965 AS3MTQ9HBK9 375 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 SWAP70Q9UH65 585 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 AFG3L2Q9Y4W6 797 aa31.34■■■□□ 2.61
SURF1-203ENST00000463965 GSG1L2A8MUP6 293 aa31.33■■■□□ 2.61
SURF1-203ENST00000463965 PATL2C9JE40 543 aaKnown RBP31.33■■■□□ 2.61
SURF1-203ENST00000463965 CYP2D6P10635 497 aa31.33■■■□□ 2.61
SURF1-203ENST00000463965 C12orf60Q5U649 245 aa31.33■■■□□ 2.61
SURF1-203ENST00000463965 CCDC136Q96JN2 1154 aa31.33■■■□□ 2.61
SURF1-203ENST00000463965 PTPN18Q99952 460 aa31.33■■■□□ 2.61
SURF1-203ENST00000463965 GDF11O95390 407 aa31.32■■■□□ 2.6
SURF1-203ENST00000463965 TBC1D8O95759 1140 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms