RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 DEFB115Q30KQ5 88 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 CYP4F22Q6NT55 531 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 ZKSCAN4Q969J2 545 aaPredicted RBP24.26■■□□□ 1.47
NUP43-205ENST00000463048 IL25Q9H293 177 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 CCDC171Q6TFL3 1326 aa24.26■■□□□ 1.47
NUP43-205ENST00000463048 OTOFQ9HC10 1997 aa24.25■■□□□ 1.47
NUP43-205ENST00000463048 MINDY4BA8MYZ0 360 aa24.25■■□□□ 1.47
NUP43-205ENST00000463048 INPP5BP32019 993 aa24.25■■□□□ 1.47
NUP43-205ENST00000463048 ZNF157P51786 506 aaPredicted RBP24.25■■□□□ 1.47
NUP43-205ENST00000463048 TTC6Q86TZ1 520 aa24.25■■□□□ 1.47
NUP43-205ENST00000463048 IFNL3Q8IZI9 196 aa24.25■■□□□ 1.47
NUP43-205ENST00000463048 KLRG1Q96E93 195 aa24.25■■□□□ 1.47
NUP43-205ENST00000463048 MKRN3Q13064 507 aaKnown RBP24.24■■□□□ 1.47
NUP43-205ENST00000463048 CTR9Q6PD62 1173 aa24.24■■□□□ 1.47
NUP43-205ENST00000463048 TICAM2Q86XR7 235 aa24.24■■□□□ 1.47
NUP43-205ENST00000463048 AMOTL1Q8IY63 956 aa24.24■■□□□ 1.47
NUP43-205ENST00000463048 DYNLL2Q96FJ2 89 aa24.24■■□□□ 1.47
NUP43-205ENST00000463048 ELP3Q9H9T3 547 aa24.24■■□□□ 1.47
NUP43-205ENST00000463048 MAP3K9P80192 1104 aa24.23■■□□□ 1.47
NUP43-205ENST00000463048 LDLRAD1Q5T700 205 aa24.23■■□□□ 1.47
NUP43-205ENST00000463048 RGMBQ6NW40 437 aa24.23■■□□□ 1.47
NUP43-205ENST00000463048 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.23■■□□□ 1.47
NUP43-205ENST00000463048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.23■■□□□ 1.47
NUP43-205ENST00000463048 NACAP1Q9BZK3 213 aa24.23■■□□□ 1.47
NUP43-205ENST00000463048 NAPBQ9H115 298 aa24.23■■□□□ 1.47
NUP43-205ENST00000463048 RASSF10A6NK89 507 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 FOXP2O15409 715 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 VGLL4Q14135 290 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 MAP3K11Q16584 847 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 ANKRD13AQ8IZ07 590 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 SLC10A4Q96EP9 437 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 DNAJC18Q9H819 358 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 CSADQ9Y600 493 aa24.22■■□□□ 1.47
NUP43-205ENST00000463048 MFAP1P55081 439 aaKnown RBP24.21■■□□□ 1.47
NUP43-205ENST00000463048 FOXP4Q8IVH2 680 aaPredicted RBP24.21■■□□□ 1.47
NUP43-205ENST00000463048 SLC44A5Q8NCS7 719 aa24.21■■□□□ 1.47
NUP43-205ENST00000463048 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
NUP43-205ENST00000463048 CNKSR2Q8WXI2 1034 aa24.21■■□□□ 1.47
NUP43-205ENST00000463048 CAPNS2Q96L46 248 aa24.21■■□□□ 1.47
NUP43-205ENST00000463048 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.21■■□□□ 1.47
NUP43-205ENST00000463048 HERC5Q9UII4 1024 aaKnown RBP24.21■■□□□ 1.47
NUP43-205ENST00000463048 SERPINB13Q9UIV8 391 aa24.21■■□□□ 1.47
NUP43-205ENST00000463048 PHF20L1A8MW92 1017 aa24.2■■□□□ 1.46
NUP43-205ENST00000463048 HSPD1P10809 573 aaKnown RBP24.2■■□□□ 1.46
NUP43-205ENST00000463048 VEGFBP49765 207 aa24.2■■□□□ 1.46
NUP43-205ENST00000463048 RRP1BQ14684 758 aaKnown RBP24.2■■□□□ 1.46
NUP43-205ENST00000463048 C12orf60Q5U649 245 aa24.2■■□□□ 1.46
NUP43-205ENST00000463048 ARPP21Q9UBL0 812 aaPredicted RBP24.2■■□□□ 1.46
NUP43-205ENST00000463048 TBC1D12O60347 775 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 AOC2O75106 756 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 GDF11O95390 407 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 MAP3K10Q02779 954 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 SHROOM1Q2M3G4 852 aaPredicted RBP24.19■■□□□ 1.46
NUP43-205ENST00000463048 GIMAP6Q6P9H5 292 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 RASAL3Q86YV0 1011 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 ZNF112Q9UJU3 913 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 SNCAIPQ9Y6H5 919 aa24.19■■□□□ 1.46
NUP43-205ENST00000463048 CDC45O75419 566 aa24.18■■□□□ 1.46
NUP43-205ENST00000463048 CCDC84Q86UT8 332 aaPredicted RBP24.18■■□□□ 1.46
NUP43-205ENST00000463048 EHD4Q9H223 541 aa24.18■■□□□ 1.46
NUP43-205ENST00000463048 WDR33Q9C0J8 1336 aaKnown RBP24.17■■□□□ 1.46
NUP43-205ENST00000463048 LAMB1P07942 1786 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 RAD50Q92878 1312 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 SGSM2O43147 1006 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 FGAP02671 866 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 SHMT1P34896 483 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 CTDSPL2Q05D32 466 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 SBK1Q52WX2 424 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 METTL16Q86W50 562 aaKnown RBP24.16■■□□□ 1.46
NUP43-205ENST00000463048 OPTNQ96CV9 577 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 OTUD5Q96G74 571 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 HHIPL1Q96JK4 782 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 ESYT1Q9BSJ8 1104 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 PICK1Q9NRD5 415 aa24.16■■□□□ 1.46
NUP43-205ENST00000463048 CTNND1O60716 968 aaKnown RBP24.15■■□□□ 1.46
NUP43-205ENST00000463048 SLC10A3P09131 477 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 ECE1P42892 770 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 HAND2P61296 217 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 JAG1P78504 1218 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 GABPAQ06546 454 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 PPARAQ07869 468 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 CASC1Q6TDU7 716 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 SCYL3Q8IZE3 742 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 WNK4Q96J92 1243 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 ZIC5Q96T25 663 aa24.15■■□□□ 1.46
NUP43-205ENST00000463048 FAM155AB1AL88 458 aaPredicted RBP24.14■■□□□ 1.45
NUP43-205ENST00000463048 MPHOSPH10O00566 681 aaKnown RBP24.14■■□□□ 1.45
NUP43-205ENST00000463048 GJA5P36382 358 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 CAP2P40123 477 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 CDK8P49336 464 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 PTH1RQ03431 593 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 DOCK1Q14185 1865 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 CERKLQ49MI3 558 aaPredicted RBP24.14■■□□□ 1.45
NUP43-205ENST00000463048 DNAJC5GQ8N7S2 189 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 CCDC102AQ96A19 550 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 ATAD5Q96QE3 1844 aa24.14■■□□□ 1.45
NUP43-205ENST00000463048 PRDM1O75626 825 aa24.13■■□□□ 1.45
NUP43-205ENST00000463048 ALX1Q15699 326 aa24.13■■□□□ 1.45
NUP43-205ENST00000463048 SPRYD7Q5W111 196 aa24.13■■□□□ 1.45
NUP43-205ENST00000463048 C16orf86Q6ZW13 317 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms