RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 SAPCD2Q86UD0 394 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 SLC10A4Q96EP9 437 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 FAM227BQ96M60 508 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 SEC62Q99442 399 aaKnown RBP7.61□□□□□ -1.19
SF3B1-206ENST00000462613 EHD4Q9H223 541 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 PICK1Q9NRD5 415 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 SWAP70Q9UH65 585 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 CTNNA3Q9UI47 895 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 PALD1Q9ULE6 856 aa7.61□□□□□ -1.19
SF3B1-206ENST00000462613 PTPRFP10586 1907 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 RASSF10A6NK89 507 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 MINDY4BA8MYZ0 360 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 USP17L12C9JPN9 530 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 USP17L21D6R901 530 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 UBE2Q2LH0YL09 131 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 CTNND1O60716 968 aaKnown RBP7.6□□□□□ -1.19
SF3B1-206ENST00000462613 USP2O75604 605 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-206ENST00000462613 ASNSP08243 561 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 FMR1Q06787 632 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3B1-206ENST00000462613 NOGQ13253 232 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 GRM1Q13255 1194 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 SLC4A8Q2Y0W8 1093 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 SLFNL1Q499Z3 407 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 SBK1Q52WX2 424 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 ZFPM1Q8IX07 1006 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 REM2Q8IYK8 340 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-206ENST00000462613 IFNL3Q8IZI9 196 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3B1-206ENST00000462613 KLRG1Q96E93 195 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 BEGAINQ9BUH8 593 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 TBC1D2Q9BYX2 928 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 AS3MTQ9HBK9 375 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 GINM1Q9NU53 330 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.6□□□□□ -1.19
SF3B1-206ENST00000462613 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
SF3B1-206ENST00000462613 SSC5DA1L4H1 1573 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 ZMYM6O95789 1325 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 GSG1L2A8MUP6 293 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 PRKAB2O43741 272 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 CHGBP05060 677 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 ZBTB48P10074 688 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 PCP11498 1178 aaKnown RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 CHMLP26374 656 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 ALX1Q15699 326 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 IMMTQ16891 758 aaKnown RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 CERKLQ49MI3 558 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 C12orf60Q5U649 245 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 DLK2Q6UY11 383 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 CCDC129Q6ZRS4 1044 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 ERO1BQ86YB8 467 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 SCYL3Q8IZE3 742 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 ZNF444Q8N0Y2 327 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 CAPNS2Q96L46 248 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 CCDC17Q96LX7 622 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 DSCC1Q9BVC3 393 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 RNF41Q9H4P4 317 aaPredicted RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 MKNK2Q9HBH9 465 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
SF3B1-206ENST00000462613 PHIPQ8WWQ0 1821 aa7.59□□□□□ -1.19
SF3B1-206ENST00000462613 WDR33Q9C0J8 1336 aaKnown RBP7.58□□□□□ -1.2
SF3B1-206ENST00000462613 MPHOSPH10O00566 681 aaKnown RBP7.58□□□□□ -1.2
SF3B1-206ENST00000462613 ZNF213O14771 459 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 SGSM2O43147 1006 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 REC8O95072 547 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 HSPD1P10809 573 aaKnown RBP7.58□□□□□ -1.2
SF3B1-206ENST00000462613 MAP2K2P36507 400 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 NT5C2P49902 561 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 MAP3K10Q02779 954 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 PPARAQ07869 468 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 SREBF2Q12772 1141 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 VGLL4Q14135 290 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 ABCB5Q2M3G0 1257 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 PPP4R3BQ5MIZ7 849 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 NOL9Q5SY16 702 aaKnown RBP7.58□□□□□ -1.2
SF3B1-206ENST00000462613 LDLRAD1Q5T700 205 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 RNF20Q5VTR2 975 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 OTUD7BQ6GQQ9 843 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 CTR9Q6PD62 1173 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 MOB2Q70IA6 237 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 SH3BP5LQ7L8J4 393 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 METTL16Q86W50 562 aaKnown RBP7.58□□□□□ -1.2
SF3B1-206ENST00000462613 CDAN1Q8IWY9 1227 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 ELP3Q9H9T3 547 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 ANO2Q9NQ90 1003 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 TOMM22Q9NS69 142 aa7.58□□□□□ -1.2
SF3B1-206ENST00000462613 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
SF3B1-206ENST00000462613 MANSC4A6NHS7 340 aaPredicted RBP7.57□□□□□ -1.2
SF3B1-206ENST00000462613 SPDYE5A6NIY4 337 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 FAM196BA6NMK8 535 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 FGAP02671 866 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 SLC10A3P09131 477 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 INPP5BP32019 993 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 CAP2P40123 477 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 PLCD1P51178 756 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 GTF2A2P52657 109 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 INHBEP58166 350 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 PPATQ06203 517 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 TRDNQ13061 729 aa7.57□□□□□ -1.2
SF3B1-206ENST00000462613 CYP4F22Q6NT55 531 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms