RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 MCM9Q9NXL9 1143 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
COL18A1-206ENST00000459895 GSG1L2A8MUP6 293 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 FAM155AB1AL88 458 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-206ENST00000459895 SMIM22K7EJ46 135 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 HLA-DOAP06340 250 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 SLC10A3P09131 477 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 INPP5BP32019 993 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 LDLRAD1Q5T700 205 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-206ENST00000459895 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 CAPNS2Q96L46 248 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 ATP8A2Q9NTI2 1148 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.39■□□□□ 0.05
COL18A1-206ENST00000459895 RAD50Q92878 1312 aa15.39■□□□□ 0.05
COL18A1-206ENST00000459895 VEGFBP49765 207 aa15.38■□□□□ 0.05
COL18A1-206ENST00000459895 RGMBQ6NW40 437 aa15.38■□□□□ 0.05
COL18A1-206ENST00000459895 CWC27Q6UX04 472 aaKnown RBP15.38■□□□□ 0.05
COL18A1-206ENST00000459895 ANKRD13AQ8IZ07 590 aa15.38■□□□□ 0.05
COL18A1-206ENST00000459895 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-206ENST00000459895 EHD4Q9H223 541 aa15.38■□□□□ 0.05
COL18A1-206ENST00000459895 ELP3Q9H9T3 547 aa15.38■□□□□ 0.05
COL18A1-206ENST00000459895 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-206ENST00000459895 ARPP21Q9UBL0 812 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-206ENST00000459895 HERC5Q9UII4 1024 aaKnown RBP15.38■□□□□ 0.05
COL18A1-206ENST00000459895 PHF20L1A8MW92 1017 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 HIP1O00291 1037 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 GNAT2P19087 354 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 CHMLP26374 656 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 TDO2P48775 406 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 PLCD1P51178 756 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 ZNF157P51786 506 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-206ENST00000459895 MAP3K10Q02779 954 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 RRP1BQ14684 758 aaKnown RBP15.37■□□□□ 0.05
COL18A1-206ENST00000459895 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-206ENST00000459895 DEFB115Q30KQ5 88 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 MCMDC2Q4G0Z9 681 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 CRACR2BQ8N4Y2 399 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-206ENST00000459895 SLC44A5Q8NCS7 719 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.37■□□□□ 0.054e-35■□□□□ 8.8
COL18A1-206ENST00000459895 PI4KBQ9UBF8 816 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 ZNF112Q9UJU3 913 aa15.37■□□□□ 0.05
COL18A1-206ENST00000459895 TBC1D12O60347 775 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 AOC2O75106 756 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-206ENST00000459895 GJA5P36382 358 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 NOL9Q5SY16 702 aaKnown RBP15.36■□□□□ 0.05
COL18A1-206ENST00000459895 CTR9Q6PD62 1173 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 METTL16Q86W50 562 aaKnown RBP15.36■□□□□ 0.05
COL18A1-206ENST00000459895 DNAJC5GQ8N7S2 189 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 WNK4Q96J92 1243 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 SERPINB13Q9UIV8 391 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 CSADQ9Y600 493 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 ZMYM6O95789 1325 aa15.36■□□□□ 0.05
COL18A1-206ENST00000459895 WDR33Q9C0J8 1336 aaKnown RBP15.36■□□□□ 0.05
COL18A1-206ENST00000459895 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 USP17L21D6R901 530 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 SHMT1P34896 483 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 MAP3K9P80192 1104 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 GABPAQ06546 454 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 MKRN3Q13064 507 aaKnown RBP15.35■□□□□ 0.05
COL18A1-206ENST00000459895 GIMAP6Q6P9H5 292 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 TTC6Q86TZ1 520 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 TRIM34Q9BYJ4 488 aa15.35■□□□□ 0.05
COL18A1-206ENST00000459895 PCNTO95613 3336 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 SPDYE5A6NIY4 337 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 GDF11O95390 407 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 APPP05067 770 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 ECE1P42892 770 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 CCDC84Q86UT8 332 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-206ENST00000459895 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 IFNL3Q8IZI9 196 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 OPTNQ96CV9 577 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 OTUD5Q96G74 571 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 ZIC5Q96T25 663 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 NAPBQ9H115 298 aa15.34■□□□□ 0.05
COL18A1-206ENST00000459895 UNCXA6NJT0 531 aa15.33■□□□□ 0.04
COL18A1-206ENST00000459895 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.04
COL18A1-206ENST00000459895 JAG1P78504 1218 aa15.33■□□□□ 0.04
COL18A1-206ENST00000459895 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
COL18A1-206ENST00000459895 SPRYD7Q5W111 196 aa15.33■□□□□ 0.04
COL18A1-206ENST00000459895 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.04
COL18A1-206ENST00000459895 NACAP1Q9BZK3 213 aa15.33■□□□□ 0.04
COL18A1-206ENST00000459895 PATL2C9JE40 543 aaKnown RBP15.32■□□□□ 0.04
COL18A1-206ENST00000459895 SGSM2O43147 1006 aa15.32■□□□□ 0.04
COL18A1-206ENST00000459895 CDC45O75419 566 aa15.32■□□□□ 0.04
COL18A1-206ENST00000459895 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
COL18A1-206ENST00000459895 NOGQ13253 232 aa15.32■□□□□ 0.04
COL18A1-206ENST00000459895 TATDN1Q6P1N9 297 aa15.32■□□□□ 0.04
COL18A1-206ENST00000459895 ZBTB21Q9ULJ3 1066 aa15.32■□□□□ 0.04
COL18A1-206ENST00000459895 MYH4Q9Y623 1939 aa15.32■□□□□ 0.04
COL18A1-206ENST00000459895 MINDY4BA8MYZ0 360 aa15.31■□□□□ 0.04
COL18A1-206ENST00000459895 ZBTB48P10074 688 aaPredicted RBP15.31■□□□□ 0.04
COL18A1-206ENST00000459895 CAP2P40123 477 aa15.31■□□□□ 0.04
COL18A1-206ENST00000459895 PPARAQ07869 468 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms