RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11□□□□□ -0.65
UFD1-205ENST00000459854 GOLGA6CA6NDK9 693 aa11□□□□□ -0.65
UFD1-205ENST00000459854 GOLGA6DP0CG33 693 aa11□□□□□ -0.65
UFD1-205ENST00000459854 MXRA7P84157 204 aa11□□□□□ -0.65
UFD1-205ENST00000459854 SEPT14Q6ZU15 432 aa11□□□□□ -0.65
UFD1-205ENST00000459854 ZNF365Q70YC5 407 aa11□□□□□ -0.65
UFD1-205ENST00000459854 RPAINQ86UA6 219 aa11□□□□□ -0.65
UFD1-205ENST00000459854 GTF3C6Q969F1 213 aa11□□□□□ -0.65
UFD1-205ENST00000459854 ZSWIM4Q9H7M6 989 aa11□□□□□ -0.65
UFD1-205ENST00000459854 GOLGA6AQ9NYA3 693 aa11□□□□□ -0.65
UFD1-205ENST00000459854 ABCA3Q99758 1704 aa11□□□□□ -0.65
UFD1-205ENST00000459854 PDE8AO60658 829 aa11□□□□□ -0.65
UFD1-205ENST00000459854 CCDC96Q2M329 555 aa11□□□□□ -0.65
UFD1-205ENST00000459854 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
UFD1-205ENST00000459854 RAD50Q92878 1312 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 PPP1R14CQ8TAE6 165 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 SPON1Q9HCB6 807 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 SRP68Q9UHB9 627 aaKnown RBP10.99□□□□□ -0.65
UFD1-205ENST00000459854 SERPINB2P05120 415 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 GCKRQ14397 625 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.658e-9■■■■■ 33.2
UFD1-205ENST00000459854 ZBTB16Q05516 673 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 FAM89AQ96GI7 184 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 LARSQ9P2J5 1176 aaKnown RBP10.99□□□□□ -0.65
UFD1-205ENST00000459854 NEURL1BA8MQ27 555 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 NOP2P46087 812 aaKnown RBP10.99□□□□□ -0.65
UFD1-205ENST00000459854 IRX4P78413 519 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 CEP120Q8N960 986 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 CALML4Q96GE6 196 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 TCP11L1Q9NUJ3 509 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 COL18A1P39060 1754 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 RGPD5Q99666 1765 aa10.99□□□□□ -0.65
UFD1-205ENST00000459854 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 CASQ2O14958 399 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 ZEB2O60315 1214 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 MMP10P09238 476 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 AOPEPQ8N6M6 819 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 MED4Q9NPJ6 270 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.98□□□□□ -0.65
UFD1-205ENST00000459854 DACT1Q9NYF0 836 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 PCCAP05165 728 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 RASSF2P50749 326 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 ZBTB38Q8NAP3 1195 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 NAPGQ99747 312 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 ANKIB1Q9P2G1 1089 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 ATF5Q9Y2D1 282 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 NEBLO76041 1014 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 RLBP1P12271 317 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 GCKP35557 465 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 CHMP4BP1P59074 171 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 TMEM132AQ24JP5 1023 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 METTL24Q5JXM2 366 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 SSBP05455 408 aaKnown RBP eCLIP10.98□□□□□ -0.65
UFD1-205ENST00000459854 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 IKQ13123 557 aaPredicted RBP10.98□□□□□ -0.65
UFD1-205ENST00000459854 MTMR3Q13615 1198 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 EFCAB13Q8IY85 973 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 CCDC26Q8TAB7 109 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 DNAJC25Q9H1X3 360 aa10.98□□□□□ -0.65
UFD1-205ENST00000459854 ACTN2P35609 894 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 LMBR1LQ6UX01 489 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 LDHAL6AQ6ZMR3 332 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 SIL1Q9H173 461 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 CNPY2Q9Y2B0 182 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 NDC80O14777 642 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 OAS2P29728 719 aaKnown RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.65
UFD1-205ENST00000459854 DDX23Q9BUQ8 820 aaKnown RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 ECHDC1Q9NTX5 307 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 PSDA5PKW4 1024 aaPredicted RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 MATR3P43243 847 aaKnown RBP eCLIP10.97□□□□□ -0.65
UFD1-205ENST00000459854 APBA1Q02410 837 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 INTS5Q6P9B9 1019 aaKnown RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 KIAA1524Q8TCG1 905 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 NEK1Q96PY6 1258 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 PLCB1Q9NQ66 1216 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 RGL2O15211 777 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 CTNNA2P26232 953 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 IFT20Q8IY31 132 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 TBC1D5Q92609 795 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 JARID2Q92833 1246 aaPredicted RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 MEIS3Q99687 375 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 BAG1Q99933 345 aaPredicted RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 IL1RAPL2Q9NP60 686 aa10.97□□□□□ -0.65
UFD1-205ENST00000459854 TFIP11Q9UBB9 837 aaKnown RBP10.97□□□□□ -0.65
UFD1-205ENST00000459854 PSMA7O14818 248 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 ZBTB7AO95365 584 aa10.96□□□□□ -0.65
UFD1-205ENST00000459854 IFIT1P09914 478 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms