RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 KCNH2Q12809 1159 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 NBPF9Q3BBW0 867 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 SUPT20HL1Q3ZLR7 823 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 ANKRD13AQ8IZ07 590 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 CELF1Q92879 486 aaKnown RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 PHACTR3Q96KR7 559 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 INSM2Q96T92 566 aaPredicted RBP2.8□□□□□ -1.96
NEDD1-204ENST00000457368 GOPCQ9HD26 462 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 EVA1BQ9NVM1 165 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 GGA1Q9UJY5 639 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 COL4A1P02462 1669 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 LAMB2P55268 1798 aa2.8□□□□□ -1.96
NEDD1-204ENST00000457368 SGPL1O95470 568 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 HOXD10P28358 340 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 C4orf48Q5BLP8 95 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 C17orf99Q6UX52 265 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 PRICKLE2Q7Z3G6 844 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 CRIPAKQ8N1N5 446 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 BRI3BPQ8WY22 251 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 RTF1Q92541 710 aaKnown RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 ZBTB3Q9H5J0 574 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 POLMQ9NP87 494 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 DNMT3LQ9UJW3 386 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 ANGEL1Q9UNK9 670 aaKnown RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 SIAH2O43255 324 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 USP2O75604 605 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 HCLS1P14317 486 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 PRKAR2BP31323 418 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 IREB2P48200 963 aaKnown RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 GTF2A2P52657 109 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 IRF5Q13568 498 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 KIF22Q14807 665 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 PTPRNQ16849 979 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 RIPOR1Q6ZS17 1223 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 TDHQ8IZJ6 230 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 LINC00528Q8N1L1 170 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 OGFOD1Q8N543 542 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 FAM174AQ8TBP5 190 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 GUCD1Q96NT3 240 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 COA1Q9GZY4 146 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 XDHP47989 1333 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 TMEM265A0A087WTH1 108 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 FAM181BA6NEQ2 426 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 WDHD1O75717 1129 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 AP1G2O75843 785 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 UFL1O94874 794 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 CCL5P13501 91 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 GRK4P32298 578 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 UBXN2AP68543 259 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 MTFR1Q15390 333 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 RTL5Q5HYW3 569 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 C15orf52Q6ZUT6 534 aaKnown RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 RIC3Q7Z5B4 369 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 KCTD17Q8N5Z5 321 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 U2AF1L4Q8WU68 220 aaKnown RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 CLMNQ96JQ2 1002 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 DEFB129Q9H1M3 183 aa2.79□□□□□ -1.96
NEDD1-204ENST00000457368 PAK6Q9NQU5 681 aaPredicted RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 TRMT112Q9UI30 125 aaKnown RBP2.79□□□□□ -1.96
NEDD1-204ENST00000457368 SPDYE5A6NIY4 337 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 CTDSPL2Q05D32 466 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 TAF1CQ15572 869 aaPredicted RBP2.78□□□□□ -1.96
NEDD1-204ENST00000457368 PRAMEF18Q5VWM3 479 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 GPAT2Q6NUI2 795 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 ZBTB33Q86T24 672 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 BPHLQ86WA6 291 aaPredicted RBP2.78□□□□□ -1.96
NEDD1-204ENST00000457368 SH3TC2Q8TF17 1288 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 KRTAP4-8Q9BYQ9 185 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 STAP2Q9UGK3 403 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 RRP7AQ9Y3A4 280 aaKnown RBP2.78□□□□□ -1.96
NEDD1-204ENST00000457368 RIPOR2Q9Y4F9 1068 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 HOXB7P09629 217 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.78□□□□□ -1.96
NEDD1-204ENST00000457368 MCM10Q7L590 875 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 ANKRD23Q86SG2 305 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 FAM43AQ8N2R8 423 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 PLBD2Q8NHP8 589 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.78□□□□□ -1.96
NEDD1-204ENST00000457368 KIFC2Q96AC6 838 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 FAM122AQ96E09 287 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 TMPRSS4Q9NRS4 437 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 LEMD3Q9Y2U8 911 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 CEP290O15078 2479 aa2.78□□□□□ -1.96
NEDD1-204ENST00000457368 CCL15-CCL14A0A0B4J2E2 113 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 TTLL8A6PVC2 850 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 TRIM66O15016 1216 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 BCRP11274 1271 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 CETPP11597 493 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 CCL15Q16663 113 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 MYSM1Q5VVJ2 828 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 Q7L0L9 218 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 COPS6Q7L5N1 327 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 NECAB2Q7Z6G3 386 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 EPS8L1Q8TE68 723 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 OPTNQ96CV9 577 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 NUDCQ9Y266 331 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 IRS2Q9Y4H2 1338 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 TAF1P21675 1872 aa2.77□□□□□ -1.97
NEDD1-204ENST00000457368 U2SURPO15042 1029 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms