RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 CHMLP26374 656 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 MAGEA9P43362 315 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 SNX16P57768 344 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 FANCCQ00597 558 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 DMPKQ09013 629 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 CCSAPQ6IQ19 270 aaPredicted RBP5.68□□□□□ -1.5
EPHA3-202ENST00000452448 SEPT14Q6ZU15 432 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 SDCCAG8Q86SQ7 713 aaPredicted RBP5.68□□□□□ -1.5
EPHA3-202ENST00000452448 VPS52Q8N1B4 723 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 LILRB1Q8NHL6 650 aaPredicted RBP5.68□□□□□ -1.5
EPHA3-202ENST00000452448 CABLES1Q8TDN4 633 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 PARD3BQ8TEW8 1205 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 ANKRD49Q8WVL7 239 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 SNX21Q969T3 373 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 ASIC4Q96FT7 647 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 KCNK17Q96T54 332 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 TGIF2Q9GZN2 237 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 VPS33BQ9H267 617 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 TNMDQ9H2S6 317 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 AVENQ9NQS1 362 aaPredicted RBP5.68□□□□□ -1.5
EPHA3-202ENST00000452448 LCMT1Q9UIC8 334 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 DDX41Q9UJV9 622 aaKnown RBP5.68□□□□□ -1.5
EPHA3-202ENST00000452448 GTF3C4Q9UKN8 822 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 INTUQ9ULD6 942 aa5.68□□□□□ -1.5
EPHA3-202ENST00000452448 MIA2Q96PC5 1412 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 POTEB3A0JP26 581 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 AKR1B10O60218 316 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 FOXD2O60548 495 aaPredicted RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 ERLIN1O75477 346 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 ABL1P00519 1130 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 USP17L8P0C7I0 530 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 MCM5P33992 734 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 HDAC4P56524 1084 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 POLR2FP61218 127 aaKnown RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 ITIH3Q06033 890 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 ARHGEF6Q15052 776 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 PTPN14Q15678 1187 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 MUM1Q2TAK8 710 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 RNF20Q5VTR2 975 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 POTEBQ6S5H4 581 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 NBPF15Q8N660 670 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 EPS8L1Q8TE68 723 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 PIBF1Q8WXW3 757 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 EZH1Q92800 747 aaPredicted RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 DNAI2Q9GZS0 605 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 RNF19AQ9NV58 838 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 KIAA1468Q9P260 1216 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 SSX2IPQ9Y2D8 614 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 EID1Q9Y6B2 187 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 PTPRKQ15262 1439 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 A0A1W2PRQ8 180 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 H3BRB1 525 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 GCFC2P16383 781 aaKnown RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 GNALP38405 381 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 PRSS12P56730 875 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 HSD17B7P56937 341 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 GUCY1B3Q02153 619 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 RASA2Q15283 850 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 WASHC4Q2M389 1173 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 CCDC152Q4G0S7 254 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 EAPPQ56P03 285 aaPredicted RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 GOLGA5Q8TBA6 731 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 IPCEF1Q8WWN9 437 aaPredicted RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 TSGA10Q9BZW7 698 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 OSBPL5Q9H0X9 879 aaPredicted RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 TUT1Q9H6E5 874 aaKnown RBP5.67□□□□□ -1.5
EPHA3-202ENST00000452448 CNTLNQ9NXG0 1405 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 HDAC6Q9UBN7 1215 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 CNPY2Q9Y2B0 182 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 NDUFB9Q9Y6M9 179 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 GCC2Q8IWJ2 1684 aa5.67□□□□□ -1.5
EPHA3-202ENST00000452448 BCORL1Q5H9F3 1711 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 PLEKHG2Q9H7P9 1386 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 TMEM238LA0A1B0GVL6 79 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 RPN1P04843 607 aaKnown RBP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 COL6A1P12109 1028 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 ELF1P32519 619 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 UBASH3AP57075 661 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 EIF4G2P78344 907 aaKnown RBP eCLIP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 SEPT7Q16181 437 aaKnown RBP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 RC3H1Q5TC82 1133 aaKnown RBP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 IRGCQ6NXR0 463 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 BRSK2Q8IWQ3 736 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 CEP57L1Q8IYX8 460 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 TMCO5AQ8N6Q1 288 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 ZNF713Q8N859 430 aaPredicted RBP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 FAM76AQ8TAV0 307 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 SUN5Q8TC36 379 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 ZNF496Q96IT1 587 aaPredicted RBP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 GMLQ99445 158 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 EYA1Q99502 592 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 TTC12Q9H892 705 aaPredicted RBP5.66□□□□□ -1.5
EPHA3-202ENST00000452448 FBXL5Q9UKA1 691 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 PRELID1Q9Y255 219 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 PIK3R4Q99570 1358 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 TBKBP1A7MCY6 615 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 GOLGA6L19H0YKK7 550 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 BPIFB3P59826 476 aa5.66□□□□□ -1.5
EPHA3-202ENST00000452448 UBXN2AP68543 259 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms