RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CCAR1Q8IX12 1150 aaKnown RBP15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 GPRC5AQ8NFJ5 357 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 WDR66Q8TBY9 1149 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 RNPC3Q96LT9 517 aaKnown RBP15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 ZNF576Q9H609 170 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 ADAMTS8Q9UP79 889 aa15.88■□□□□ 0.13
AC004540.1-204ENST00000449537 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 DNM1LO00429 736 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 RGS3P49796 1198 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 AKNAD1Q5T1N1 836 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 LPAR1Q92633 364 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 USP6NLQ92738 828 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 GAS2L1Q99501 681 aaPredicted RBP15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 BDP1A6H8Y1 2624 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 LTBP2Q14767 1821 aa15.87■□□□□ 0.13
AC004540.1-204ENST00000449537 MAST2Q6P0Q8 1798 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 MSCO60682 206 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 DNAJB2P25686 324 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 MAPK4P31152 587 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 HMGCS2P54868 508 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 SLC39A5Q6ZMH5 540 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 ZNF280CQ8ND82 737 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 LRFN3Q9BTN0 628 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 DDX20Q9UHI6 824 aaKnown RBP15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 PHIPQ8WWQ0 1821 aa15.86■□□□□ 0.13
AC004540.1-204ENST00000449537 SLURP2P0DP57 97 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 CNGA1P29973 690 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 IRX3P78415 501 aaPredicted RBP15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 RALBP1Q15311 655 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 METTL24Q5JXM2 366 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 MFSD14CQ5VZR4 134 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 POTEEQ6S8J3 1075 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 SH3BP5LQ7L8J4 393 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 IDI2Q9BXS1 227 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 PIEZO1Q92508 2521 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 MYO9BQ13459 2157 aa15.85■□□□□ 0.13
AC004540.1-204ENST00000449537 DDTLA6NHG4 134 aaPredicted RBP15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 PDE8BO95263 885 aa15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 MORN1Q5T089 497 aa15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 ALYREFQ86V81 257 aaKnown RBP15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 ARRDC4Q8NCT1 418 aa15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 SNX27Q96L92 541 aa15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 P2RX7Q99572 595 aaKnown RBP15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 APBA2Q99767 749 aa15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 TBC1D2Q9BYX2 928 aa15.84■□□□□ 0.13
AC004540.1-204ENST00000449537 DOCK1Q14185 1865 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 TRIM43BA6NCK2 446 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 GRM8O00222 908 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 PEX10O60683 326 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 CCDC85BQ15834 202 aaPredicted RBP15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 GPR142Q7Z601 462 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 SH3RF1Q7Z6J0 888 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 PLEKHH3Q7Z736 793 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 TRIM43Q96BQ3 446 aaPredicted RBP15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 TIFAQ96CG3 184 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 NECAB3Q96P71 396 aaPredicted RBP15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 TXNRD2Q9NNW7 524 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 PDLIM7Q9NR12 457 aa15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 C9orf78Q9NZ63 289 aaPredicted RBP15.83■□□□□ 0.12
AC004540.1-204ENST00000449537 APAF1O14727 1248 aa15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 TBC1D12O60347 775 aa15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 LDHBP07195 334 aaKnown RBP15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 IFIT1P09914 478 aaKnown RBP15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 Q3C1V9 767 aa15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 TRIM60Q495X7 471 aa15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 GJC2Q5T442 439 aaPredicted RBP15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 EDC3Q96F86 508 aaKnown RBP15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 OSBPL5Q9H0X9 879 aaPredicted RBP15.82■□□□□ 0.12
AC004540.1-204ENST00000449537 PRDX5P30044 214 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 HOXA7P31268 230 aaPredicted RBP15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 EPHB4P54760 987 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 HERVK_113P62684 666 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 MAP2K5Q13163 448 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 LRRC24Q50LG9 513 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 DOCK2Q92608 1830 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 PORCNQ9H237 461 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 PRDM12Q9H4Q4 367 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 CWC22Q9HCG8 908 aaKnown RBP15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 RBPJLQ9UBG7 517 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
AC004540.1-204ENST00000449537 TCF20Q9UGU0 1960 aaKnown RBP15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 UTYO14607 1347 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 USP17L5A8MUK1 530 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 KBTBD13C9JR72 458 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 F6X3S4 739 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 BMP1P13497 986 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 TMEM31Q5JXX7 168 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 EPHX3Q9H6B9 360 aa15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.8■□□□□ 0.12
AC004540.1-204ENST00000449537 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 GLRX3O76003 335 aaKnown RBP15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 ERVK-9P63128 1117 aa15.79■□□□□ 0.12
AC004540.1-204ENST00000449537 ERVK-24P63145 666 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms