RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 LIFRP42702 1097 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 METAP2P50579 478 aaKnown RBP eCLIP11.35□□□□□ -0.59
RFC4-210ENST00000449502 CCT2P78371 535 aaKnown RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 HMGN5P82970 282 aaKnown RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 IFIT1BQ5T764 474 aaKnown RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 CATIPQ7Z7H3 387 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 CRACR2BQ8N4Y2 399 aaPredicted RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 GBP4Q96PP9 640 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 ZSCAN10Q96SZ4 725 aaPredicted RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 ZKSCAN3Q9BRR0 538 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 OSBPL5Q9H0X9 879 aaPredicted RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 DHX36Q9H2U1 1008 aaKnown RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
RFC4-210ENST00000449502 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
RFC4-210ENST00000449502 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
RFC4-210ENST00000449502 FGRP09769 529 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 LMNB1P20700 586 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 DDIT3P35638 169 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 PLCD1P51178 756 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 TFAP4Q01664 338 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 SCRN1Q12765 414 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
RFC4-210ENST00000449502 RAB3GAP1Q15042 981 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 DYNLL2Q96FJ2 89 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 GPHNQ9NQX3 736 aaPredicted RBP11.34□□□□□ -0.59
RFC4-210ENST00000449502 SWAP70Q9UH65 585 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
RFC4-210ENST00000449502 CACNA1SQ13698 1873 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 TNKSO95271 1327 aa11.34□□□□□ -0.59
RFC4-210ENST00000449502 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
RFC4-210ENST00000449502 DOCK2Q92608 1830 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 GOLGA6L22H0YM25 854 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 H3BQV1 296 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 CALM1P0DP23 149 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 CALM2P0DP24 149 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 CALM3P0DP25 149 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 CDK8P49336 464 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 EVCP57679 992 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 TCP10Q12799 353 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 FAM47AQ5JRC9 791 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 LARP1BQ659C4 914 aaKnown RBP11.33□□□□□ -0.6
RFC4-210ENST00000449502 C16orf86Q6ZW13 317 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 SGMS1Q86VZ5 419 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 SYT17Q9BSW7 474 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 IDI2Q9BXS1 227 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 TDRD3Q9H7E2 651 aaKnown RBP11.33□□□□□ -0.6
RFC4-210ENST00000449502 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 BRPF3Q9ULD4 1205 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 MAST2Q6P0Q8 1798 aa11.33□□□□□ -0.6
RFC4-210ENST00000449502 PTPDC1A2A3K4 754 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 ENTPD3O75355 529 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 NPM3O75607 178 aaKnown RBP11.32□□□□□ -0.6
RFC4-210ENST00000449502 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 TNNI2P48788 182 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 CACNB3P54284 484 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 RTN1Q16799 776 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
RFC4-210ENST00000449502 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 PRMT6Q96LA8 375 aaPredicted RBP11.32□□□□□ -0.6
RFC4-210ENST00000449502 GMLQ99445 158 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 KAT14Q9H8E8 782 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 VEZTQ9HBM0 779 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 DDX4Q9NQI0 724 aaKnown RBP11.32□□□□□ -0.6
RFC4-210ENST00000449502 PI4KBQ9UBF8 816 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 ATP6V1DQ9Y5K8 247 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 TACC3Q9Y6A5 838 aa11.32□□□□□ -0.6
RFC4-210ENST00000449502 ROBO3Q96MS0 1386 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 CLRN2A0PK11 232 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 TCP10L2B9ZVM9 353 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 H7C1D1 291 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 FZD9O00144 591 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 STX6O43752 255 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 GMPSP49915 693 aaPredicted RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 RCAN1P53805 252 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 AKAP17AQ02040 695 aaKnown RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 NFIAQ12857 509 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 NBR1Q14596 966 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 PPP2R5BQ15173 497 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 ZNF654Q8IZM8 581 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 SLC44A5Q8NCS7 719 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 DPF2Q92785 391 aa11.31□□□□□ -0.6
RFC4-210ENST00000449502 TNPO1Q92973 898 aaKnown RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 NCOA5Q9HCD5 579 aaKnown RBP11.31□□□□□ -0.6
RFC4-210ENST00000449502 ZNF70Q9UC06 446 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms