RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 ANAPC15P60006 121 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 CDC37L1Q7L3B6 337 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 TBC1D10CQ8IV04 446 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 FOXP4Q8IVH2 680 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-210ENST00000449116 CDAN1Q8IWY9 1227 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 RASEFQ8IZ41 740 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 STAG1Q8WVM7 1258 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 TBC1D32Q96NH3 1257 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 RNF41Q9H4P4 317 aaPredicted RBP17.37■□□□□ 0.37
SHANK2-210ENST00000449116 SERPINB13Q9UIV8 391 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 SNX14Q9Y5W7 946 aa17.37■□□□□ 0.37
SHANK2-210ENST00000449116 PCP11498 1178 aaKnown RBP17.36■□□□□ 0.37
SHANK2-210ENST00000449116 GABPAQ06546 454 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 PDE4BQ07343 736 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 KRT32Q14532 448 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 AKNAD1Q5T1N1 836 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 C16orf86Q6ZW13 317 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 STK11IPQ8N1F8 1099 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 DYNLL2Q96FJ2 89 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 TRIM34Q9BYJ4 488 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 SWAP70Q9UH65 585 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 TAF6LQ9Y6J9 622 aa17.36■□□□□ 0.37
SHANK2-210ENST00000449116 E7EWF7 191 aa17.35■□□□□ 0.37
SHANK2-210ENST00000449116 FGRP09769 529 aa17.35■□□□□ 0.37
SHANK2-210ENST00000449116 MAP1SQ66K74 1059 aaPredicted RBP17.35■□□□□ 0.37
SHANK2-210ENST00000449116 MFSD6Q6ZSS7 791 aa17.35■□□□□ 0.37
SHANK2-210ENST00000449116 STOX1Q6ZVD7 989 aa17.35■□□□□ 0.37
SHANK2-210ENST00000449116 METTL16Q86W50 562 aaKnown RBP17.35■□□□□ 0.37
SHANK2-210ENST00000449116 CRACR2BQ8N4Y2 399 aaPredicted RBP17.35■□□□□ 0.37
SHANK2-210ENST00000449116 HOOK2Q96ED9 719 aa17.35■□□□□ 0.37
SHANK2-210ENST00000449116 GLIS2Q9BZE0 524 aaPredicted RBP17.35■□□□□ 0.37
SHANK2-210ENST00000449116 ZNF287Q9HBT7 754 aa17.35■□□□□ 0.37
SHANK2-210ENST00000449116 HERC5Q9UII4 1024 aaKnown RBP17.35■□□□□ 0.37
SHANK2-210ENST00000449116 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 TBC1D12O60347 775 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 POLR2AP24928 1970 aaKnown RBP17.34■□□□□ 0.37
SHANK2-210ENST00000449116 CDK8P49336 464 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 SUPT20HL1Q3ZLR7 823 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 NBPF12Q5TAG4 269 aaPredicted RBP17.34■□□□□ 0.37
SHANK2-210ENST00000449116 PRAMEF18Q5VWM3 479 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 IL17RAQ96F46 866 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
SHANK2-210ENST00000449116 TACC3Q9Y6A5 838 aa17.34■□□□□ 0.37
SHANK2-210ENST00000449116 NEDD4P46934 1319 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 KIF3CO14782 793 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 ORC4O43929 436 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 NT5C2P49902 561 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 MAP3K10Q02779 954 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 TRDNQ13061 729 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 CDCA5Q96FF9 252 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 KRT23Q9C075 422 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 DNAJC18Q9H819 358 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 CNNM2Q9H8M5 875 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.33■□□□□ 0.364e-7■■■□□ 19
SHANK2-210ENST00000449116 MKNK2Q9HBH9 465 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 INCENPQ9NQS7 918 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
SHANK2-210ENST00000449116 PRDM1O75626 825 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 PSMA5P28066 241 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 SHMT1P34896 483 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 ADCK5Q3MIX3 580 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 RRP12Q5JTH9 1297 aaKnown RBP17.32■□□□□ 0.36
SHANK2-210ENST00000449116 MIGA2Q7L4E1 593 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 RALYLQ86SE5 291 aaKnown RBP17.32■□□□□ 0.36
SHANK2-210ENST00000449116 NCOA7Q8NI08 942 aa17.32■□□□□ 0.36
SHANK2-210ENST00000449116 FAM196BA6NMK8 535 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 NF2P35240 595 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 DLK2Q6UY11 383 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 ZNF784Q8NCA9 323 aaPredicted RBP17.31■□□□□ 0.36
SHANK2-210ENST00000449116 ESR2Q92731 530 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 JAKMIP1Q96N16 626 aaKnown RBP17.31■□□□□ 0.36
SHANK2-210ENST00000449116 NEK1Q96PY6 1258 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 SSC5DA1L4H1 1573 aa17.31■□□□□ 0.36
SHANK2-210ENST00000449116 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
SHANK2-210ENST00000449116 RASA1P20936 1047 aa17.3■□□□□ 0.36
SHANK2-210ENST00000449116 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
SHANK2-210ENST00000449116 ZNF444Q8N0Y2 327 aaPredicted RBP17.3■□□□□ 0.36
SHANK2-210ENST00000449116 KIF2CQ99661 725 aa17.3■□□□□ 0.36
SHANK2-210ENST00000449116 ZNF341Q9BYN7 854 aa17.3■□□□□ 0.36
SHANK2-210ENST00000449116 B4E1Z4 1266 aa17.29■□□□□ 0.36
SHANK2-210ENST00000449116 RANBP6O60518 1105 aaKnown RBP17.29■□□□□ 0.36
SHANK2-210ENST00000449116 KDM4AO75164 1064 aa17.29■□□□□ 0.36
SHANK2-210ENST00000449116 CASTP20810 708 aaKnown RBP17.29■□□□□ 0.36
SHANK2-210ENST00000449116 CERKLQ49MI3 558 aaPredicted RBP17.29■□□□□ 0.36
SHANK2-210ENST00000449116 BLOC1S2Q6QNY1 142 aa17.29■□□□□ 0.36
SHANK2-210ENST00000449116 TSPY2A6NKD2 308 aa17.28■□□□□ 0.36
SHANK2-210ENST00000449116 TRAF5O00463 557 aa17.28■□□□□ 0.36
SHANK2-210ENST00000449116 NKX2-3Q8TAU0 364 aa17.28■□□□□ 0.36
SHANK2-210ENST00000449116 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
SHANK2-210ENST00000449116 ZSWIM6Q9HCJ5 1215 aa17.28■□□□□ 0.36
SHANK2-210ENST00000449116 PHF20L1A8MW92 1017 aa17.27■□□□□ 0.36
SHANK2-210ENST00000449116 PPP1R12BO60237 982 aaPredicted RBP17.27■□□□□ 0.36
SHANK2-210ENST00000449116 ITGBL1O95965 494 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms