RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 PCP11498 1178 aaKnown RBP20.3■□□□□ 0.84
SMC6-206ENST00000446852 IL1R1P14778 569 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 KLHL34Q8N239 644 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 PDLIM2Q96JY6 352 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 ARPP21Q9UBL0 812 aaPredicted RBP20.3■□□□□ 0.84
SMC6-206ENST00000446852 TAOK2Q9UL54 1235 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 RCAN1P53805 252 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 SSRP1Q08945 709 aaKnown RBP20.3■□□□□ 0.84
SMC6-206ENST00000446852 NLGN1Q8N2Q7 840 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 CLSTN2Q9H4D0 955 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 MKRN1Q9UHC7 482 aaKnown RBP20.3■□□□□ 0.84
SMC6-206ENST00000446852 CLIC4Q9Y696 253 aa20.3■□□□□ 0.84
SMC6-206ENST00000446852 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 SBK1Q52WX2 424 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 NBPF11Q86T75 865 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 CMTR1Q8N1G2 835 aaKnown RBP20.29■□□□□ 0.84
SMC6-206ENST00000446852 FANCBQ8NB91 859 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 SH3RF3Q8TEJ3 882 aaPredicted RBP20.29■□□□□ 0.84
SMC6-206ENST00000446852 NUP133Q8WUM0 1156 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 GOLPH3LQ9H4A5 285 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
SMC6-206ENST00000446852 ORC4O43929 436 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 IGSF3O75054 1194 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 GUCY1A2P33402 732 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
SMC6-206ENST00000446852 USP17L8P0C7I0 530 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 LINC00301Q8NCQ3 95 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 TNMDQ9H2S6 317 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 POLR3EQ9NVU0 708 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 ME1P48163 572 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 SLC4A8Q2Y0W8 1093 aa20.28■□□□□ 0.84
SMC6-206ENST00000446852 RBM43Q6ZSC3 357 aaKnown RBP20.28■□□□□ 0.84
SMC6-206ENST00000446852 CCAR1Q8IX12 1150 aaKnown RBP20.28■□□□□ 0.84
SMC6-206ENST00000446852 RGPD3A6NKT7 1758 aaPredicted RBP20.27■□□□□ 0.84
SMC6-206ENST00000446852 RGPD4Q7Z3J3 1758 aa20.27■□□□□ 0.84
SMC6-206ENST00000446852 GSTO1P78417 241 aa20.27■□□□□ 0.84
SMC6-206ENST00000446852 IQCA1Q86XH1 822 aa20.27■□□□□ 0.84
SMC6-206ENST00000446852 CKAP2LQ8IYA6 745 aa20.27■□□□□ 0.84
SMC6-206ENST00000446852 CCDC82Q8N4S0 544 aa20.27■□□□□ 0.84
SMC6-206ENST00000446852 MROH7-TTC4A0A0A0MT08 1334 aa20.27■□□□□ 0.84
SMC6-206ENST00000446852 DDX60LQ5H9U9 1706 aaKnown RBP20.27■□□□□ 0.84
SMC6-206ENST00000446852 SRGNP10124 158 aa20.27■□□□□ 0.83
SMC6-206ENST00000446852 IFIT1BQ5T764 474 aaKnown RBP20.27■□□□□ 0.83
SMC6-206ENST00000446852 SP8Q8IXZ3 490 aa20.27■□□□□ 0.83
SMC6-206ENST00000446852 CRACR2BQ8N4Y2 399 aaPredicted RBP20.27■□□□□ 0.83
SMC6-206ENST00000446852 TRIM44Q96DX7 344 aaPredicted RBP20.27■□□□□ 0.83
SMC6-206ENST00000446852 RRAGDQ9NQL2 400 aaPredicted RBP20.27■□□□□ 0.83
SMC6-206ENST00000446852 PCDHA7Q9UN72 937 aa20.27■□□□□ 0.83
SMC6-206ENST00000446852 CCDC196A0A1B0GTZ2 297 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 NMT2O60551 498 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 RTFDC1Q9BY42 306 aaPredicted RBP20.26■□□□□ 0.83
SMC6-206ENST00000446852 YEATS4O95619 227 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 MMP10P09238 476 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 CCDC192P0DO97 292 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 PPP4CP60510 307 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 FAM47AQ5JRC9 791 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 TMC4Q7Z404 712 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 ATP6V0A2Q9Y487 856 aa20.26■□□□□ 0.83
SMC6-206ENST00000446852 RXRBP28702 533 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 USP5P45974 858 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 SNW1Q13573 536 aaKnown RBP20.25■□□□□ 0.83
SMC6-206ENST00000446852 TRIM29Q14134 588 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 OLFM4Q6UX06 510 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 TRIM22Q8IYM9 498 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 U2AF2P26368 475 aaKnown RBP eCLIP20.25■□□□□ 0.831e-8■■■■□ 20
SMC6-206ENST00000446852 STK38Q15208 465 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 C12orf60Q5U649 245 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 WASF1Q92558 559 aa20.25■□□□□ 0.83
SMC6-206ENST00000446852 FOCADQ5VW36 1801 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 BAG3O95817 575 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 SLC3A2P08195 630 aaKnown RBP20.24■□□□□ 0.83
SMC6-206ENST00000446852 TROAPQ12815 778 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 MFSD14BQ5SR56 506 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 ANO1Q5XXA6 986 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 ENGASEQ8NFI3 743 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 LDHCP07864 332 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 TYRO3Q06418 890 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 PDE4BQ07343 736 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 MSL1Q68DK7 614 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 FLAD1Q8NFF5 587 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 KCNG4Q8TDN1 519 aa20.24■□□□□ 0.83
SMC6-206ENST00000446852 ROBO3Q96MS0 1386 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 MYH1P12882 1939 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 SPTLC2O15270 562 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 DEXIO95424 95 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 NPR1P16066 1061 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 ADALQ6DHV7 355 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 FSIP1Q8NA03 581 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 TGFBRAP1Q8WUH2 860 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.23■□□□□ 0.83
SMC6-206ENST00000446852 MRVI1Q9Y6F6 885 aa20.23■□□□□ 0.83
SMC6-206ENST00000446852 BTDP43251 543 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 FAM160A1Q05DH4 1040 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 FUT2Q10981 343 aa20.22■□□□□ 0.83
SMC6-206ENST00000446852 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
SMC6-206ENST00000446852 PPP2R5BQ15173 497 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms