RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TBC1D16Q8TBP0 767 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 PI4KBQ9UBF8 816 aa16.13■□□□□ 0.17
SMARCA4-204ENST00000444061 CAMK4Q16566 473 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 PAGR1Q9BTK6 254 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 LRRC27Q9C0I9 530 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 GDPD2Q9HCC8 539 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 PXDNQ92626 1479 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 PRDX5P30044 214 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 ZSCAN10Q96SZ4 725 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 NAP1L1P55209 391 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 ZNRF3Q9ULT6 936 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 NAP1L4Q99733 375 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 TSG101Q99816 390 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
SMARCA4-204ENST00000444061 ZNF654Q8IZM8 581 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 LRRC47Q8N1G4 583 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 NCOA5Q9HCD5 579 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 IQCA1LA6NCM1 817 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 IREB2P48200 963 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 STXBP4Q6ZWJ1 553 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 KCNG4Q8TDN1 519 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 TM6SF1Q9BZW5 370 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 TNKSO95271 1327 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 KLHL10Q6JEL2 608 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 PNMA1Q8ND90 353 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 RIPOR2Q9Y4F9 1068 aa16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 TBCAO75347 108 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 TMED8Q6PL24 325 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-204ENST00000444061 USH1GQ495M9 461 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 ODF2Q5BJF6 829 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 TNPO1Q92973 898 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 FAM84BQ96KN1 310 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 ABT1Q9ULW3 272 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 CSF1RP07333 972 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 SP4Q02446 784 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 INTS4Q96HW7 963 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 CAMTA1Q9Y6Y1 1673 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 PRKAB2O43741 272 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 NASPP49321 788 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 BRDTQ58F21 947 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 OSBP2Q969R2 916 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 ADGRB2O60241 1585 aa16.1■□□□□ 0.17
SMARCA4-204ENST00000444061 BACH1O14867 736 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 POTEAQ6S8J7 498 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 FOXP4Q8IVH2 680 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 PUS7LQ9H0K6 701 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 KRT79Q5XKE5 535 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 CFBP00751 764 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 KANK3Q6NY19 840 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 LLPHQ9BRT6 129 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 SMTNL1A8MU46 457 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 M0R2C6 588 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 CTAGE5O15320 804 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 FLOT1O75955 427 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 KIF22Q14807 665 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 BRAPQ7Z569 592 aa16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 ZNHIT6Q9NWK9 470 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-204ENST00000444061 LETM2Q2VYF4 491 aa16.08■□□□□ 0.17
SMARCA4-204ENST00000444061 MIGA2Q7L4E1 593 aa16.08■□□□□ 0.17
SMARCA4-204ENST00000444061 KANSL2Q9H9L4 492 aa16.08■□□□□ 0.17
SMARCA4-204ENST00000444061 DDX19AQ9NUU7 478 aaKnown RBP16.08■□□□□ 0.17
SMARCA4-204ENST00000444061 MCM7P33993 719 aa16.08■□□□□ 0.16
SMARCA4-204ENST00000444061 GDF11O95390 407 aa16.08■□□□□ 0.16
SMARCA4-204ENST00000444061 ADCY7P51828 1080 aa16.08■□□□□ 0.16
SMARCA4-204ENST00000444061 CACNB3P54284 484 aa16.08■□□□□ 0.16
SMARCA4-204ENST00000444061 ZFYVE27Q5T4F4 411 aa16.08■□□□□ 0.16
SMARCA4-204ENST00000444061 SLC5A4Q9NY91 659 aa16.08■□□□□ 0.16
SMARCA4-204ENST00000444061 F13A1P00488 732 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 CYP2E1P05181 493 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 MYCLP12524 364 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 ANO10Q9NW15 660 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 USP14P54578 494 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 PKD2L1Q9P0L9 805 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 STAT6P42226 847 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 PPFIBP1Q86W92 1011 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 MAP4K1Q92918 833 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 SLC10A4Q96EP9 437 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 UBN2Q6ZU65 1347 aa16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 ARID4AP29374 1257 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-204ENST00000444061 SYCP3Q8IZU3 236 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 C2orf69Q8N8R5 385 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 PHKBQ93100 1093 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 MED23Q9ULK4 1368 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 FGFR1OPO95684 399 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 TRIM21P19474 475 aaKnown RBP16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 SYKP43405 635 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 TGFB2P61812 414 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 TMEM232C9JQI7 657 aa16.06■□□□□ 0.16
SMARCA4-204ENST00000444061 KLRF2D3W0D1 207 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms