RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 SREBF2Q12772 1141 aa18.97■□□□□ 0.63
ACTB-206ENST00000443528 PLEKHM2Q8IWE5 1019 aa18.97■□□□□ 0.63
ACTB-206ENST00000443528 SDR42E1Q8WUS8 393 aa18.97■□□□□ 0.63
ACTB-206ENST00000443528 DNAJC18Q9H819 358 aa18.97■□□□□ 0.63
ACTB-206ENST00000443528 HERC5Q9UII4 1024 aaKnown RBP18.97■□□□□ 0.63
ACTB-206ENST00000443528 PRKAB2O43741 272 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 CTNND1O60716 968 aaKnown RBP18.96■□□□□ 0.63
ACTB-206ENST00000443528 TRPA1O75762 1119 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 LBX1P52954 281 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 RRP1BQ14684 758 aaKnown RBP18.96■□□□□ 0.63
ACTB-206ENST00000443528 SLC4A8Q2Y0W8 1093 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
ACTB-206ENST00000443528 SCYL3Q8IZE3 742 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 OSBP2Q969R2 916 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 DCP1AQ9NPI6 582 aaPredicted RBP18.96■□□□□ 0.63
ACTB-206ENST00000443528 SAGE1Q9NXZ1 904 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 LAMB1P07942 1786 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 MYH7P12883 1935 aa18.96■□□□□ 0.63
ACTB-206ENST00000443528 TESPA1A2RU30 521 aaPredicted RBP18.95■□□□□ 0.62
ACTB-206ENST00000443528 IRF6O14896 467 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 ZFYP08048 801 aaPredicted RBP18.95■□□□□ 0.62
ACTB-206ENST00000443528 INHBEP58166 350 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 PPATQ06203 517 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 PPIL2Q13356 520 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 APPBP2Q92624 585 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 PTPN18Q99952 460 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 FSD1Q9BTV5 496 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 OSBPL3Q9H4L5 887 aa18.95■□□□□ 0.62
ACTB-206ENST00000443528 IGF2BP3O00425 579 aaKnown RBP eCLIP18.94■□□□□ 0.62
ACTB-206ENST00000443528 HLA-DOAP06340 250 aa18.94■□□□□ 0.62
ACTB-206ENST00000443528 PTPRAP18433 802 aa18.94■□□□□ 0.62
ACTB-206ENST00000443528 GTF2A2P52657 109 aa18.94■□□□□ 0.62
ACTB-206ENST00000443528 IFNL1Q8IU54 200 aa18.94■□□□□ 0.62
ACTB-206ENST00000443528 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.94■□□□□ 0.62
ACTB-206ENST00000443528 DDX60LQ5H9U9 1706 aaKnown RBP18.94■□□□□ 0.62
ACTB-206ENST00000443528 PDE4AP27815 886 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 PLCD1P51178 756 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 EVX2Q03828 476 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 CRACR2BQ8N4Y2 399 aaPredicted RBP18.93■□□□□ 0.62
ACTB-206ENST00000443528 BRI3BPQ8WY22 251 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 EVI5LQ96CN4 794 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 STRBPQ96SI9 672 aaKnown RBP18.93■□□□□ 0.62
ACTB-206ENST00000443528 PRDM10Q9NQV6 1147 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 ATP8A2Q9NTI2 1148 aa18.93■□□□□ 0.62
ACTB-206ENST00000443528 M0R2C6 588 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 CAP2P40123 477 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 JAG1P78504 1218 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 LRRFIP1Q32MZ4 808 aaKnown RBP18.92■□□□□ 0.62
ACTB-206ENST00000443528 COL13A1Q5TAT6 717 aaPredicted RBP18.92■□□□□ 0.62
ACTB-206ENST00000443528 TTC6Q86TZ1 520 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 SEC62Q99442 399 aaKnown RBP18.92■□□□□ 0.62
ACTB-206ENST00000443528 EHD4Q9H223 541 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 MCM9Q9NXL9 1143 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 KCNH4Q9UQ05 1017 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 MYH1P12882 1939 aa18.92■□□□□ 0.62
ACTB-206ENST00000443528 CCL15-CCL14A0A0B4J2E2 113 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 POLR3DP05423 398 aaPredicted RBP18.91■□□□□ 0.62
ACTB-206ENST00000443528 CYP2D6P10635 497 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 SNAPC2Q13487 334 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 CCL15Q16663 113 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 ZMYM1Q5SVZ6 1142 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 CCDC84Q86UT8 332 aaPredicted RBP18.91■□□□□ 0.62
ACTB-206ENST00000443528 SERPINB13Q9UIV8 391 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 AFG3L2Q9Y4W6 797 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 ZHX2Q9Y6X8 837 aa18.91■□□□□ 0.62
ACTB-206ENST00000443528 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 GPAA1O43292 621 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 TBC1D8O95759 1140 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 CETPP11597 493 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 GABPAQ06546 454 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 SHROOM1Q2M3G4 852 aaPredicted RBP18.9■□□□□ 0.62
ACTB-206ENST00000443528 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 CFHR5Q9BXR6 569 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 R3HDMLQ9H3Y0 253 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 DOCK1Q14185 1865 aa18.9■□□□□ 0.62
ACTB-206ENST00000443528 GSG1L2A8MUP6 293 aa18.89■□□□□ 0.61
ACTB-206ENST00000443528 ALDH1A1P00352 501 aa18.89■□□□□ 0.61
ACTB-206ENST00000443528 MOGSQ13724 837 aa18.89■□□□□ 0.61
ACTB-206ENST00000443528 FAM43AQ8N2R8 423 aa18.89■□□□□ 0.61
ACTB-206ENST00000443528 TRIM6-TRIM34B2RNG4 842 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 USP17L12C9JPN9 530 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 USP17L21D6R901 530 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 SMIM22K7EJ46 135 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 CXCL11O14625 94 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 GDF11O95390 407 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 SHMT1P34896 483 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 CTR9Q6PD62 1173 aa18.88■□□□□ 0.61
ACTB-206ENST00000443528 CYP2D7A0A087X1C5 515 aa18.87■□□□□ 0.61
ACTB-206ENST00000443528 BTBD19C9JJ37 291 aa18.87■□□□□ 0.61
ACTB-206ENST00000443528 C12orf60Q5U649 245 aa18.87■□□□□ 0.61
ACTB-206ENST00000443528 OTUD7BQ6GQQ9 843 aa18.87■□□□□ 0.61
ACTB-206ENST00000443528 RILPL2Q969X0 211 aa18.87■□□□□ 0.61
ACTB-206ENST00000443528 EPB41L4AQ9HCS5 686 aaPredicted RBP18.87■□□□□ 0.61
ACTB-206ENST00000443528 PHIPQ8WWQ0 1821 aa18.86■□□□□ 0.61
ACTB-206ENST00000443528 A0A0G2JLL6 359 aaPredicted RBP18.86■□□□□ 0.61
ACTB-206ENST00000443528 USP17L5A8MUK1 530 aa18.86■□□□□ 0.61
ACTB-206ENST00000443528 ASNSP08243 561 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms