RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 NFIAQ12857 509 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 MPRIPQ6WCQ1 1025 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 REC114Q7Z4M0 266 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 MCF2L2Q86YR7 1114 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 GPBAR1Q8TDU6 330 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 ACSBG1Q96GR2 724 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 FAM46AQ96IP4 442 aaKnown RBP4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 ZC3H12CQ9C0D7 883 aaKnown RBP4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 C7orf69Q9H7B7 122 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 GINM1Q9NU53 330 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 STOML1Q9UBI4 398 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 STRIP2Q9ULQ0 834 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 EFR3BQ9Y2G0 817 aa4.99□□□□□ -1.61
NEFMP1-201ENST00000443423 MEGF11A6BM72 1044 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 ZNF862O60290 1169 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 DLGAP3O95886 979 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 GLB1P16278 677 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 HOXA10P31260 410 aaPredicted RBP4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 NASPP49321 788 aaPredicted RBP4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 ZNF165P49910 485 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 PDE3AQ14432 1141 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 SEZ6Q53EL9 994 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 EXOSC6Q5RKV6 272 aaKnown RBP4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 KIAA1211Q6ZU35 1233 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 REXO1Q8N1G1 1221 aaKnown RBP4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 FBXO27Q8NI29 283 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 PPP1R1BQ9UD71 204 aaPredicted RBP4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 PCDHA4Q9UN74 947 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 TACC3Q9Y6A5 838 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 SNCAIPQ9Y6H5 919 aa4.98□□□□□ -1.61
NEFMP1-201ENST00000443423 GFRA2O00451 464 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 TLR3O15455 904 aaKnown RBP4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 AOC2O75106 756 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 SLFN14P0C7P3 912 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 LIG1P18858 919 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 RBL2Q08999 1139 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 DUOXA2Q1HG44 320 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 RNF43Q68DV7 783 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 HDXQ7Z353 690 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 UBASH3BQ8TF42 649 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 WDR89Q96FK6 387 aaPredicted RBP4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 WDR18Q9BV38 432 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 TMPRSS13Q9BYE2 586 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 PCDHGC5Q9Y5F6 944 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 PRR36Q9H6K5 1346 aa4.97□□□□□ -1.61
NEFMP1-201ENST00000443423 GSC2O15499 205 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 ATE1O95260 518 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 SSBP05455 408 aaKnown RBP eCLIP4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 IMPDH2P12268 514 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 GTF2F1P35269 517 aaKnown RBP eCLIP4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 INPP5AQ14642 412 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 ZC3H12AQ5D1E8 599 aaKnown RBP4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 WIPI1Q5MNZ9 446 aaPredicted RBP4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 ABI1Q8IZP0 508 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 PLPPR2Q96GM1 343 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 RUSC1Q9BVN2 902 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 HIRIP3Q9BW71 556 aaPredicted RBP4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 RNF208Q9H0X6 261 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 EHMT1Q9H9B1 1298 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 SUGCTQ9HAC7 445 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 BRMS1Q9HCU9 246 aa4.96□□□□□ -1.62
NEFMP1-201ENST00000443423 DHX15O43143 795 aaKnown RBP4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 MCM4P33991 863 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 ERVK-24P63145 666 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 ID3Q02535 119 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 RING1Q06587 406 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 OGFOD2Q6N063 350 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 LRFN4Q6PJG9 635 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 ACAD11Q709F0 780 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 CBLL1Q75N03 491 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 CYFIP1Q7L576 1253 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 SMG8Q8ND04 991 aaKnown RBP4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 DHX38Q92620 1227 aaKnown RBP4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 SRRTQ9BXP5 876 aaKnown RBP4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 RAD18Q9NS91 495 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 ZNRF3Q9ULT6 936 aa4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 POLR3KQ9Y2Y1 108 aaPredicted RBP4.95□□□□□ -1.62
NEFMP1-201ENST00000443423 STK10O94804 968 aaKnown RBP4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 CDK8P49336 464 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 SOGA3Q5TF21 947 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 NUTM2GQ5VZR2 741 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 INTS5Q6P9B9 1019 aaKnown RBP4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 SHISA5Q8N114 240 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 RBBP8NLQ8NC74 664 aaPredicted RBP4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 OR6P1Q8NGX9 317 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 SHKBP1Q8TBC3 707 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 CPLX3Q8WVH0 158 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 ELMO3Q96BJ8 720 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 SHDQ96IW2 340 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 MYRFLQ96LU7 910 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 FERD3LQ96RJ6 166 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 DBNDD2Q9BQY9 259 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 CYP4F12Q9HCS2 524 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 CRIM1Q9NZV1 1036 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 PPT2Q9UMR5 302 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 PCDHB14Q9Y5E9 798 aa4.94□□□□□ -1.62
NEFMP1-201ENST00000443423 DCDC2CA8MYV0 355 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms