RNA–Protein interactions for RNA: ENST00000442744.6

UBA52-202, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA52, Length 2,845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-202ENST00000442744 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
UBA52-202ENST00000442744 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
UBA52-202ENST00000442744 RIPK4P57078 832 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 DCAF8Q5TAQ9 597 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 PRPF38BQ5VTL8 546 aaKnown RBP12.28□□□□□ -0.44
UBA52-202ENST00000442744 GALNT17Q6IS24 598 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 LVRNQ6Q4G3 990 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 GBP4Q96PP9 640 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 PLEKHA5Q9HAU0 1116 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 EXOC1Q9NV70 894 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 CLIP2Q9UDT6 1046 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 PGAP2Q9UHJ9 254 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 IPPQ9Y573 584 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 TULP2O00295 520 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 DNAJB2P25686 324 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 PRPHP41219 470 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 DALRD3Q5D0E6 543 aaKnown RBP12.28□□□□□ -0.44
UBA52-202ENST00000442744 IL31Q6EBC2 164 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 ARHGEF28Q8N1W1 1705 aaKnown RBP12.28□□□□□ -0.44
UBA52-202ENST00000442744 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 PCDHGB7Q9Y5F8 929 aa12.28□□□□□ -0.44
UBA52-202ENST00000442744 RASA4BC9J798 803 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 MAP3K7O43318 606 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 NR1I2O75469 434 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 MRPL28Q13084 256 aaKnown RBP12.27□□□□□ -0.44
UBA52-202ENST00000442744 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.44
UBA52-202ENST00000442744 RMDN2Q96LZ7 410 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.44
UBA52-202ENST00000442744 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 ZNF700Q9H0M5 742 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 ZBTB40Q9NUA8 1239 aa12.27□□□□□ -0.44
UBA52-202ENST00000442744 CAMSAP1Q5T5Y3 1602 aa12.27□□□□□ -0.45
UBA52-202ENST00000442744 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.45
UBA52-202ENST00000442744 CDC45O75419 566 aa12.27□□□□□ -0.45
UBA52-202ENST00000442744 B3GALNT1O75752 331 aa12.27□□□□□ -0.45
UBA52-202ENST00000442744 ATF7P17544 494 aaPredicted RBP12.27□□□□□ -0.45
UBA52-202ENST00000442744 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
UBA52-202ENST00000442744 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
UBA52-202ENST00000442744 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 RASA4O43374 803 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 HALP42357 657 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 MASP1P48740 699 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 NEK3P51956 506 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 EIF4A2Q14240 407 aaKnown RBP12.26□□□□□ -0.45
UBA52-202ENST00000442744 SHROOM1Q2M3G4 852 aaPredicted RBP12.26□□□□□ -0.45
UBA52-202ENST00000442744 MUM1Q2TAK8 710 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 TRMT2BQ96GJ1 504 aaKnown RBP12.26□□□□□ -0.45
UBA52-202ENST00000442744 MFRPQ9BY79 579 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 PCSK1NQ9UHG2 260 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 FCHSD2O94868 740 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 MYLK4Q86YV6 388 aaPredicted RBP12.26□□□□□ -0.45
UBA52-202ENST00000442744 DCLK2Q8N568 766 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
UBA52-202ENST00000442744 ASB16Q96NS5 453 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
UBA52-202ENST00000442744 SIGLEC1Q9BZZ2 1709 aa12.26□□□□□ -0.45
UBA52-202ENST00000442744 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
UBA52-202ENST00000442744 F8VZ95 297 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 FYB1O15117 783 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 RAC2P15153 192 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 FILIP1LQ4L180 1135 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 C10orf76Q5T2E6 689 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 CCDC129Q6ZRS4 1044 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 ASIC4Q96FT7 647 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 BAG1Q99933 345 aaPredicted RBP12.25□□□□□ -0.45
UBA52-202ENST00000442744 PRMT3O60678 531 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 ARIH2O95376 493 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 TRDNQ13061 729 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 SEPT7Q16181 437 aaKnown RBP12.25□□□□□ -0.45
UBA52-202ENST00000442744 ARMC4Q5T2S8 1044 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 KCT2Q8NC54 265 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 ANKRD49Q8WVL7 239 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 PDRG1Q9NUG6 133 aa12.25□□□□□ -0.45
UBA52-202ENST00000442744 FGRP09769 529 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 PNMA8AQ86V59 439 aaPredicted RBP12.24□□□□□ -0.45
UBA52-202ENST00000442744 IFNL2Q8IZJ0 200 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 SRPK1Q96SB4 655 aaKnown RBP12.24□□□□□ -0.45
UBA52-202ENST00000442744 VEZTQ9HBM0 779 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 BTF3P20290 206 aaKnown RBP12.24□□□□□ -0.45
UBA52-202ENST00000442744 PIP4K2BP78356 416 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 SERINC3Q13530 473 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 PKN1Q16512 942 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 KIF4BQ2VIQ3 1234 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 NEK10Q6ZWH5 1172 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 DGKHQ86XP1 1220 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 CNTN3Q9P232 1028 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 ABCC11Q96J66 1382 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 E2F6O75461 281 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 IFIT2P09913 472 aaKnown RBP12.24□□□□□ -0.45
UBA52-202ENST00000442744 FOXK1P85037 733 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 PAK2Q13177 524 aa12.24□□□□□ -0.45
UBA52-202ENST00000442744 ZNF211Q13398 564 aaPredicted RBP12.24□□□□□ -0.45
UBA52-202ENST00000442744 GAS2L3Q86XJ1 694 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms