RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CRNKL1Q9BZJ0 848 aaKnown RBP12.07□□□□□ -0.48
CPNE1-218ENST00000439806 TNKSO95271 1327 aa12.07□□□□□ -0.48
CPNE1-218ENST00000439806 UBR3Q6ZT12 1888 aa12.06□□□□□ -0.48
CPNE1-218ENST00000439806 WTIPA6NIX2 430 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-218ENST00000439806 SLC3A2P08195 630 aaKnown RBP12.06□□□□□ -0.48
CPNE1-218ENST00000439806 CMA1P23946 247 aa12.06□□□□□ -0.48
CPNE1-218ENST00000439806 KLRK1P26718 216 aa12.06□□□□□ -0.48
CPNE1-218ENST00000439806 NDUFA8P51970 172 aa12.06□□□□□ -0.48
CPNE1-218ENST00000439806 MECOMQ03112 1051 aa12.06□□□□□ -0.48
CPNE1-218ENST00000439806 PPP2R5BQ15173 497 aa12.06□□□□□ -0.48
CPNE1-218ENST00000439806 TMED8Q6PL24 325 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-218ENST00000439806 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-218ENST00000439806 NAT10Q9H0A0 1025 aaKnown RBP12.06□□□□□ -0.48
CPNE1-218ENST00000439806 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-218ENST00000439806 CUTAO60888 179 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 ZNF202O95125 648 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 CALM1P0DP23 149 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 CALM2P0DP24 149 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 CALM3P0DP25 149 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 PFKFB1P16118 471 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 XBP1P17861 261 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 U2AF2P26368 475 aaKnown RBP eCLIP12.05□□□□□ -0.483e-26■□□□□ 9.9
CPNE1-218ENST00000439806 MARCKSP29966 332 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 GRAPQ13588 217 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 IQCB1Q15051 598 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 SEC23AQ15436 765 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 DNTTIP2Q5QJE6 756 aaKnown RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 CATIPQ7Z7H3 387 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 IQCA1Q86XH1 822 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 FANCBQ8NB91 859 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 PIBF1Q8WXW3 757 aa12.05□□□□□ -0.48
CPNE1-218ENST00000439806 NSUN4Q96CB9 384 aaKnown RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 ZSCAN10Q96SZ4 725 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 RBM28Q9NW13 759 aaKnown RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 R3HCC1Q9Y3T6 440 aaKnown RBP12.05□□□□□ -0.48
CPNE1-218ENST00000439806 CYP2D7A0A087X1C5 515 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 MMP1P03956 469 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 CDC25BP30305 580 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 SYKP43405 635 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 TERF1P54274 439 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 TPM4P67936 248 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 PTPAQ15257 358 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 AXDND1Q5T1B0 1012 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 IFIT1BQ5T764 474 aaKnown RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 DIS3L2Q8IYB7 885 aaKnown RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 CRACR2BQ8N4Y2 399 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 TIGD1Q96MW7 591 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 NOL10Q9BSC4 688 aaKnown RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 RNF26Q9BY78 433 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 ARPP21Q9UBL0 812 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-218ENST00000439806 LEMD3Q9Y2U8 911 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 MROH7-TTC4A0A0A0MT08 1334 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 AFF2P51816 1311 aa12.04□□□□□ -0.48
CPNE1-218ENST00000439806 USP17L12C9JPN9 530 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 USP17L21D6R901 530 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 ZBTB22O15209 634 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 ORC4O43929 436 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 IGSF3O75054 1194 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-218ENST00000439806 DDAH1O94760 285 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 ADRA2BP18089 450 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 TM4SF1P30408 202 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 NLRP12P59046 1061 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 NFIXQ14938 502 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 SARM1Q6SZW1 724 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 ZNF804AQ7Z570 1209 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 NBPF11Q86T75 865 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 CCDC82Q8N4S0 544 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 AOPEPQ8N6M6 819 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 WDR66Q8TBY9 1149 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 RPGRQ92834 1020 aaKnown RBP12.03□□□□□ -0.48
CPNE1-218ENST00000439806 FBXW7Q969H0 707 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 MAP3K14Q99558 947 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-218ENST00000439806 ATP8A2Q9NTI2 1148 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 KCNJ14Q9UNX9 436 aa12.03□□□□□ -0.48
CPNE1-218ENST00000439806 UBE2Q2LH0YL09 131 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 FGRP09769 529 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 PTGS1P23219 599 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 PRDX5P30044 214 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 GSTO1P78417 241 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 ST5P78524 1137 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 PDE4BQ07343 736 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 NOLC1Q14978 699 aaKnown RBP eCLIP12.02□□□□□ -0.493e-8■□□□□ 8.2
CPNE1-218ENST00000439806 RILPL1Q5EBL4 403 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 ENAHQ8N8S7 591 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-218ENST00000439806 ZNF384Q8TF68 577 aa12.02□□□□□ -0.49
CPNE1-218ENST00000439806 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
CPNE1-218ENST00000439806 DCP1AQ9NPI6 582 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms