RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 LGR6Q9HBX8 967 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 DAGLAQ9Y4D2 1042 aa6.1□□□□□ -1.43
TRAPPC13-204ENST00000438419 GFRA2O00451 464 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 GSC2O15499 205 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 PF4P02776 101 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 F13BP05160 661 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 LMNB1P20700 586 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 CAMK2GQ13555 558 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 MAP7Q14244 749 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 UBE3DQ7Z6J8 389 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 RELL1Q8IUW5 271 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 SHKBP1Q8TBC3 707 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 RNF34Q969K3 372 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 TMEM74Q96NL1 305 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 KRTAP4-5Q9BYR2 181 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 PIDD1Q9HB75 910 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 KBTBD4Q9NVX7 518 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 GGT7Q9UJ14 662 aa6.09□□□□□ -1.43
TRAPPC13-204ENST00000438419 PRR19A6NJB7 356 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 RNGTTO60942 597 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 GARTP22102 1010 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 LMNB2Q03252 620 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 ZBTB37Q5TC79 503 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 BNC2Q6ZN30 1099 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 ZAR1Q86SH2 424 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 JARID2Q92833 1246 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 MIR1-1HGQ9H1L0 117 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 FAM221AA4D161 298 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 MINDY4BA8MYZ0 360 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 FANCGO15287 622 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 TCF3P15923 654 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 GBP2P32456 591 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 WIPI1Q5MNZ9 446 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 DIEXFQ68CQ4 756 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 FBXL6Q8N531 539 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 ELMO3Q96BJ8 720 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 PCOLCE2Q9UKZ9 415 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 RNF114Q9Y508 228 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 SNCAIPQ9Y6H5 919 aa6.08□□□□□ -1.44
TRAPPC13-204ENST00000438419 FAM170BA6NMN3 283 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 WDR64B1ANS9 1081 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 TGFB1P01137 390 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 FAM160A1Q05DH4 1040 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 HDXQ7Z353 690 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 CCDC84Q86UT8 332 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 TBC1D32Q96NH3 1257 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 RNF112Q9ULX5 631 aa6.07□□□□□ -1.44
TRAPPC13-204ENST00000438419 PRAMEF27A3QJZ7 478 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 CILPO75339 1184 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 MED26O95402 600 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 F13A1P00488 732 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 IRAK1P51617 712 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 HDLBPQ00341 1268 aaKnown RBP6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 CDK5R2Q13319 367 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 WNT10AQ9GZT5 417 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 FBRSQ9HAH7 460 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 KCNQ5Q9NR82 932 aa6.06□□□□□ -1.44
TRAPPC13-204ENST00000438419 RANGAP1P46060 587 aaPredicted RBP6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 RPL6Q02878 288 aaKnown RBP6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 FBXL19Q6PCT2 694 aa6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 USP48Q86UV5 1035 aa6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 METTL16Q86W50 562 aaKnown RBP6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 GOLM1Q8NBJ4 401 aa6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 GATAD2BQ8WXI9 593 aa6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 ADAMTS1Q9UHI8 967 aa6.05□□□□□ -1.44
TRAPPC13-204ENST00000438419 GREM1O60565 184 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 LEFTY1O75610 366 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 SLBPQ14493 270 aaKnown RBP eCLIP6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 NKG7Q16617 165 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 OGFOD3Q6PK18 319 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 ZNF765Q7L2R6 523 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 NT5DC4Q86YG4 428 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 FBXO27Q8NI29 283 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 ZNF507Q8TCN5 953 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 SSU72Q9NP77 194 aaKnown RBP6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 PICK1Q9NRD5 415 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 IGSF5Q9NSI5 407 aa6.04□□□□□ -1.44
TRAPPC13-204ENST00000438419 HOXA10P31260 410 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 GRK4P32298 578 aa6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 EIF4A3P38919 411 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 SNAP47Q5SQN1 464 aa6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 ZNF654Q8IZM8 581 aa6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 ZNF296Q8WUU4 475 aaPredicted RBP6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 ATG3Q9NT62 314 aa6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 DDX41Q9UJV9 622 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 TACC3Q9Y6A5 838 aa6.03□□□□□ -1.44
TRAPPC13-204ENST00000438419 FAM87AP0C7U9 286 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 ZNF394Q53GI3 561 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 FAM196AQ6ZSG2 479 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 FAM214BQ7L5A3 538 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 DUSP23Q9BVJ7 150 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 OSBPL1AQ9BXW6 950 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 PIM2Q9P1W9 311 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 POLR3KQ9Y2Y1 108 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 SUPT16HQ9Y5B9 1047 aaKnown RBP6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 CORINQ9Y5Q5 1042 aa6.02□□□□□ -1.45
TRAPPC13-204ENST00000438419 ERCC5P28715 1186 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 CAP2P40123 477 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms