RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 LMBR1LQ6UX01 489 aa12.81□□□□□ -0.36
HOXD3-203ENST00000432796 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
HOXD3-203ENST00000432796 SNX27Q96L92 541 aa12.81□□□□□ -0.36
HOXD3-203ENST00000432796 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
HOXD3-203ENST00000432796 SMC4Q9NTJ3 1288 aa12.81□□□□□ -0.36
HOXD3-203ENST00000432796 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
HOXD3-203ENST00000432796 CT47B1P0C2W7 299 aaPredicted RBP12.8□□□□□ -0.36
HOXD3-203ENST00000432796 CDC42EP5Q6NZY7 148 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 BADQ92934 168 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 MORF4L1Q9UBU8 362 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 FAM198AQ9UFP1 575 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 ZNF521Q96K83 1311 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 XIRP2A4UGR9 3374 aa12.8□□□□□ -0.36
HOXD3-203ENST00000432796 CTNND1O60716 968 aaKnown RBP12.79□□□□□ -0.36
HOXD3-203ENST00000432796 PABPC4Q13310 644 aaKnown RBP eCLIP12.79□□□□□ -0.36
HOXD3-203ENST00000432796 ALDH1L2Q3SY69 923 aa12.79□□□□□ -0.36
HOXD3-203ENST00000432796 CAVIN4Q5BKX8 364 aa12.79□□□□□ -0.36
HOXD3-203ENST00000432796 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
HOXD3-203ENST00000432796 LRRFIP2Q9Y608 721 aaKnown RBP12.79□□□□□ -0.36
HOXD3-203ENST00000432796 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 DOCK3Q8IZD9 2030 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 DNM1LO00429 736 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 DNAJB2P25686 324 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 RNPC3Q96LT9 517 aaKnown RBP12.78□□□□□ -0.36
HOXD3-203ENST00000432796 ASCC2Q9H1I8 757 aaPredicted RBP12.78□□□□□ -0.36
HOXD3-203ENST00000432796 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
HOXD3-203ENST00000432796 ATP11BQ9Y2G3 1177 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
HOXD3-203ENST00000432796 SLFN5Q08AF3 891 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 CCL14Q16627 93 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.37
HOXD3-203ENST00000432796 ZFPM1Q8IX07 1006 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 MRPL50Q8N5N7 158 aaKnown RBP12.77□□□□□ -0.37
HOXD3-203ENST00000432796 PPM1EQ8WY54 764 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 USP6NLQ92738 828 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 GAS2L1Q99501 681 aaPredicted RBP12.77□□□□□ -0.37
HOXD3-203ENST00000432796 LRFN3Q9BTN0 628 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 ZNF576Q9H609 170 aa12.77□□□□□ -0.37
HOXD3-203ENST00000432796 MSCO60682 206 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 RGS2P41220 211 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 POTEEQ6S8J3 1075 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 LPAR1Q92633 364 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 APBA2Q99767 749 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
HOXD3-203ENST00000432796 PDLIM7Q9NR12 457 aa12.76□□□□□ -0.37
HOXD3-203ENST00000432796 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
HOXD3-203ENST00000432796 MAPK4P31152 587 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
HOXD3-203ENST00000432796 SSH1Q8WYL5 1049 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 SUCLG2Q96I99 432 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 KIF16BQ96L93 1317 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
HOXD3-203ENST00000432796 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
HOXD3-203ENST00000432796 DDX20Q9UHI6 824 aaKnown RBP12.75□□□□□ -0.37
HOXD3-203ENST00000432796 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.74□□□□□ -0.37
HOXD3-203ENST00000432796 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.74□□□□□ -0.37
HOXD3-203ENST00000432796 ENTPD3O75355 529 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
HOXD3-203ENST00000432796 RGS3P49796 1198 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 HMGCS2P54868 508 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 SPP2Q13103 211 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 SNX17Q15036 470 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 MORN1Q5T089 497 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 SH3BP5LQ7L8J4 393 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 GPRC5AQ8NFJ5 357 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 WDR66Q8TBY9 1149 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 NECAB3Q96P71 396 aaPredicted RBP12.74□□□□□ -0.37
HOXD3-203ENST00000432796 IDI2Q9BXS1 227 aa12.74□□□□□ -0.37
HOXD3-203ENST00000432796 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
HOXD3-203ENST00000432796 UTYO14607 1347 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 PTPRFP10586 1907 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 TRIM43BA6NCK2 446 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 NBPF7P0C2Y1 421 aaPredicted RBP12.73□□□□□ -0.37
HOXD3-203ENST00000432796 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
HOXD3-203ENST00000432796 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 TMEM31Q5JXX7 168 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 MFSD14CQ5VZR4 134 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 GPR142Q7Z601 462 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
HOXD3-203ENST00000432796 TRIM43Q96BQ3 446 aaPredicted RBP12.73□□□□□ -0.37
HOXD3-203ENST00000432796 TBC1D2Q9BYX2 928 aa12.73□□□□□ -0.37
HOXD3-203ENST00000432796 RFX7Q2KHR2 1363 aa12.72□□□□□ -0.37
HOXD3-203ENST00000432796 DDTLA6NHG4 134 aaPredicted RBP12.72□□□□□ -0.37
HOXD3-203ENST00000432796 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
HOXD3-203ENST00000432796 IFIT1P09914 478 aaKnown RBP12.72□□□□□ -0.37
HOXD3-203ENST00000432796 SLURP2P0DP57 97 aa12.72□□□□□ -0.37
HOXD3-203ENST00000432796 EPHB4P54760 987 aa12.72□□□□□ -0.37
HOXD3-203ENST00000432796 SH3RF1Q7Z6J0 888 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms