RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 TOB2Q14106 344 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 NAA30Q147X3 362 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 WASHC4Q2M389 1173 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 ZNF280DQ6N043 979 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 DRC7Q8IY82 874 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SMARCC2Q8TAQ2 1214 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 LLPHQ9BRT6 129 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SRRTQ9BXP5 876 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 DNAJC25Q9H1X3 360 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 CD2APQ9Y5K6 639 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 RBM8AQ9Y5S9 174 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 GNAT3A8MTJ3 354 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 GOLGA6L19H0YKK7 550 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SRGAP3O43295 1099 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 ADD1P35611 737 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 PRSS12P56730 875 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 KRT32Q14532 448 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 TAF7Q15545 349 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 CAMK4Q16566 473 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 ZNF746Q6NUN9 644 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 CLASRPQ8N2M8 674 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 ENGASEQ8NFI3 743 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 SPC25Q9HBM1 224 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 ZNF446Q9NWS9 450 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 TFIP11Q9UBB9 837 aaKnown RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 BIN2Q9UBW5 565 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 PRR12Q9ULL5 1215 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 IQSEC3Q9UPP2 1182 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-202ENST00000432306 FHOD1Q9Y613 1164 aa9.31□□□□□ -0.92
VTI1A-202ENST00000432306 CCDC69A6NI79 296 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 USP27XA6NNY8 438 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 PRC1O43663 620 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 ALDH1L1O75891 902 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 CPA1P15085 419 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 ELOAQ14241 798 aaKnown RBP9.3□□□□□ -0.92
VTI1A-202ENST00000432306 C9orf131Q5VYM1 1079 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 NAA16Q6N069 864 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-202ENST00000432306 BLOC1S2Q6QNY1 142 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 DHX40Q8IX18 779 aaKnown RBP9.3□□□□□ -0.92
VTI1A-202ENST00000432306 PXYLP1Q8TE99 480 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 GTF3C6Q969F1 213 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 ANO10Q9NW15 660 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 GEMIN8Q9NWZ8 242 aaKnown RBP9.3□□□□□ -0.92
VTI1A-202ENST00000432306 MIS18AQ9NYP9 233 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-202ENST00000432306 G3BP2Q9UN86 482 aaKnown RBP9.3□□□□□ -0.92
VTI1A-202ENST00000432306 UTYO14607 1347 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 PHLPP2Q6ZVD8 1323 aa9.3□□□□□ -0.92
VTI1A-202ENST00000432306 CCDC189A1A4V9 331 aa9.29□□□□□ -0.92
VTI1A-202ENST00000432306 CCP110O43303 1012 aa9.29□□□□□ -0.92
VTI1A-202ENST00000432306 COPB2P35606 906 aa9.29□□□□□ -0.92
VTI1A-202ENST00000432306 SNW1Q13573 536 aaKnown RBP9.29□□□□□ -0.92
VTI1A-202ENST00000432306 ELF2Q15723 593 aa9.29□□□□□ -0.92
VTI1A-202ENST00000432306 E4F1Q66K89 784 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-202ENST00000432306 MSL3Q8N5Y2 521 aaKnown RBP9.29□□□□□ -0.92
VTI1A-202ENST00000432306 EYA1Q99502 592 aa9.29□□□□□ -0.92
VTI1A-202ENST00000432306 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.29□□□□□ -0.929e-8■■■■■ 155.4
VTI1A-202ENST00000432306 TAF1LQ8IZX4 1826 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 SNPHO15079 494 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 TPM1P09493 284 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 SOGA3Q5TF21 947 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 C11orf57Q6ZUT1 292 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 FILIP1Q7Z7B0 1213 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 NBPF11Q86T75 865 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 FCHSD1Q86WN1 690 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 RPUSD2Q8IZ73 545 aaKnown RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 NECAB1Q8N987 351 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 FLAD1Q8NFF5 587 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 DDX54Q8TDD1 881 aaKnown RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 DNAAF4Q8WXU2 420 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 AGXT2Q9BYV1 514 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 CCNL1Q9UK58 526 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 C5P01031 1676 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 A0A1W2PQ27 194 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 A0A1W2PQ64 194 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 A0A1W2PQD8 194 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 OATP04181 439 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 NBPF7P0C2Y1 421 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 PNMA6AP0CW24 399 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 FAM160A1Q05DH4 1040 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 RBL2Q08999 1139 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 PCGF5Q86SE9 256 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 JAZF1Q86VZ6 243 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 COL23A1Q86Y22 540 aaPredicted RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 FMNL3Q8IVF7 1028 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 CEP57L1Q8IYX8 460 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 IL17REQ8NFR9 667 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 BICD2Q8TD16 824 aa9.28□□□□□ -0.92
VTI1A-202ENST00000432306 NOL10Q9BSC4 688 aaKnown RBP9.28□□□□□ -0.92
VTI1A-202ENST00000432306 NAT10Q9H0A0 1025 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms