RNA–Protein interactions for RNA: ENST00000430433.5

MRPL55-221, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5 BASIC

Gene MRPL55, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-221ENST00000430433 PTPRAP18433 802 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 CRACR2BQ8N4Y2 399 aaPredicted RBP13.76□□□□□ -0.21
MRPL55-221ENST00000430433 EDC3Q96F86 508 aaKnown RBP13.76□□□□□ -0.21
MRPL55-221ENST00000430433 HAUS7Q99871 368 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 ZCCHC17Q9NP64 241 aaKnown RBP13.76□□□□□ -0.21
MRPL55-221ENST00000430433 ECHDC1Q9NTX5 307 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 PI4KBQ9UBF8 816 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 PALD1Q9ULE6 856 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 KCNH4Q9UQ05 1017 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 DOCK1Q14185 1865 aa13.76□□□□□ -0.21
MRPL55-221ENST00000430433 ZNF532Q9HCE3 1301 aa13.75□□□□□ -0.21
MRPL55-221ENST00000430433 MAGEB6P1A0A0J9YX57 407 aa13.75□□□□□ -0.21
MRPL55-221ENST00000430433 CXCL11O14625 94 aa13.75□□□□□ -0.21
MRPL55-221ENST00000430433 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
MRPL55-221ENST00000430433 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.75□□□□□ -0.21
MRPL55-221ENST00000430433 CDK5RAP2Q96SN8 1893 aa13.75□□□□□ -0.21
MRPL55-221ENST00000430433 FOCADQ5VW36 1801 aa13.74□□□□□ -0.21
MRPL55-221ENST00000430433 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
MRPL55-221ENST00000430433 PKN2Q16513 984 aaKnown RBP13.74□□□□□ -0.21
MRPL55-221ENST00000430433 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
MRPL55-221ENST00000430433 ERO1AQ96HE7 468 aa13.74□□□□□ -0.21
MRPL55-221ENST00000430433 CRNKL1Q9BZJ0 848 aaKnown RBP13.74□□□□□ -0.21
MRPL55-221ENST00000430433 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-221ENST00000430433 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-221ENST00000430433 PDHXO00330 501 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 CAP2P40123 477 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 SP3Q02447 781 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 FASTKD5Q7L8L6 764 aaKnown RBP13.73□□□□□ -0.21
MRPL55-221ENST00000430433 CCDC84Q86UT8 332 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-221ENST00000430433 FOXP4Q8IVH2 680 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-221ENST00000430433 CD99L2Q8TCZ2 262 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 RIOK1Q9BRS2 568 aaKnown RBP13.73□□□□□ -0.21
MRPL55-221ENST00000430433 AFG3L2Q9Y4W6 797 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 TRIM17Q9Y577 477 aa13.73□□□□□ -0.21
MRPL55-221ENST00000430433 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-221ENST00000430433 TCRBV5S4A2TA0A5A2 114 aa13.72□□□□□ -0.21
MRPL55-221ENST00000430433 ADD2P35612 726 aa13.72□□□□□ -0.21
MRPL55-221ENST00000430433 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
MRPL55-221ENST00000430433 PRRT2Q7Z6L0 340 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-221ENST00000430433 SIPA1L1O43166 1804 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 MYH1P12882 1939 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 TLR2O60603 784 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 MBD4O95243 580 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-221ENST00000430433 MOGSQ13724 837 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 RRP1BQ14684 758 aaKnown RBP13.71□□□□□ -0.21
MRPL55-221ENST00000430433 ARHGEF6Q15052 776 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 ZSCAN25Q6NSZ9 544 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 FBXO46Q6PJ61 603 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-221ENST00000430433 TTC6Q86TZ1 520 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 LCORLQ8N3X6 602 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 PARK7Q99497 189 aaKnown RBP13.71□□□□□ -0.21
MRPL55-221ENST00000430433 DNAJC18Q9H819 358 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 ARMT1Q9H993 441 aa13.71□□□□□ -0.21
MRPL55-221ENST00000430433 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 USP17L5A8MUK1 530 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 GDF11O95390 407 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 ASNSP08243 561 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 SPP2Q13103 211 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 AAMPQ13685 434 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 KIF22Q14807 665 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 GPAT2Q6NUI2 795 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 OTOP1Q7RTM1 612 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
MRPL55-221ENST00000430433 ZNF280CQ8ND82 737 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 EFCC1Q9HA90 598 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 AS3MTQ9HBK9 375 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 NAV1Q8NEY1 1877 aa13.7□□□□□ -0.22
MRPL55-221ENST00000430433 ERC2O15083 957 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-221ENST00000430433 UBE3CQ15386 1083 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 ANKRD45Q5TZF3 282 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 SDR42E1Q8WUS8 393 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 EHD4Q9H223 541 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 CPA4Q9UI42 421 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 PHIPQ8WWQ0 1821 aa13.69□□□□□ -0.22
MRPL55-221ENST00000430433 MYH7P12883 1935 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 TTC41PQ6P2S7 1318 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 CYP2C8P10632 490 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 MX1P20591 662 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 HMGCS2P54868 508 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 KBTBD3Q8NAB2 608 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 OTUD7AQ8TE49 926 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-221ENST00000430433 SMCR8Q8TEV9 937 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-221ENST00000430433 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 DDRGK1Q96HY6 314 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 DCP1AQ9NPI6 582 aaPredicted RBP13.68□□□□□ -0.22
MRPL55-221ENST00000430433 GINM1Q9NU53 330 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 ZBTB21Q9ULJ3 1066 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 PTPRFP10586 1907 aa13.68□□□□□ -0.22
MRPL55-221ENST00000430433 PRKAB2O43741 272 aa13.67□□□□□ -0.22
MRPL55-221ENST00000430433 GLRX3O76003 335 aaKnown RBP13.67□□□□□ -0.22
MRPL55-221ENST00000430433 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
MRPL55-221ENST00000430433 GH2P01242 217 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms