RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 HERC5Q9UII4 1024 aaKnown RBP29.31■■■□□ 2.28
VEGFA-209ENST00000425836 ZNF112Q9UJU3 913 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 CDK5RAP2Q96SN8 1893 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 FOCADQ5VW36 1801 aa29.31■■■□□ 2.28
VEGFA-209ENST00000425836 PHF20L1A8MW92 1017 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 WRNIP1Q96S55 665 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 IL25Q9H293 177 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.3■■■□□ 2.28
VEGFA-209ENST00000425836 ANKRD13AQ8IZ07 590 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 NACAP1Q9BZK3 213 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 EHD4Q9H223 541 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 DNAJC18Q9H819 358 aa29.3■■■□□ 2.28
VEGFA-209ENST00000425836 UNCXA6NJT0 531 aa29.29■■■□□ 2.28
VEGFA-209ENST00000425836 MFAP1P55081 439 aaKnown RBP29.29■■■□□ 2.28
VEGFA-209ENST00000425836 C12orf60Q5U649 245 aa29.29■■■□□ 2.28
VEGFA-209ENST00000425836 RGMBQ6NW40 437 aa29.29■■■□□ 2.28
VEGFA-209ENST00000425836 CRACR2BQ8N4Y2 399 aaPredicted RBP29.29■■■□□ 2.28
VEGFA-209ENST00000425836 CLMNQ96JQ2 1002 aa29.29■■■□□ 2.28
VEGFA-209ENST00000425836 SERPINB13Q9UIV8 391 aa29.29■■■□□ 2.28
VEGFA-209ENST00000425836 CYP2D7A0A087X1C5 515 aa29.28■■■□□ 2.28
VEGFA-209ENST00000425836 HSPD1P10809 573 aaKnown RBP29.28■■■□□ 2.28
VEGFA-209ENST00000425836 INPP5BP32019 993 aa29.28■■■□□ 2.28
VEGFA-209ENST00000425836 RUFY2Q8WXA3 655 aa29.28■■■□□ 2.28
VEGFA-209ENST00000425836 SMIM22K7EJ46 135 aa29.27■■■□□ 2.28
VEGFA-209ENST00000425836 TDO2P48775 406 aa29.27■■■□□ 2.28
VEGFA-209ENST00000425836 SBK1Q52WX2 424 aa29.27■■■□□ 2.28
VEGFA-209ENST00000425836 ZKSCAN4Q969J2 545 aaPredicted RBP29.27■■■□□ 2.28
VEGFA-209ENST00000425836 ARPP21Q9UBL0 812 aaPredicted RBP29.27■■■□□ 2.28
VEGFA-209ENST00000425836 RAD50Q92878 1312 aa29.27■■■□□ 2.28
VEGFA-209ENST00000425836 ZNF157P51786 506 aaPredicted RBP29.26■■■□□ 2.28
VEGFA-209ENST00000425836 GABPAQ06546 454 aa29.26■■■□□ 2.28
VEGFA-209ENST00000425836 AMOTL1Q8IY63 956 aa29.26■■■□□ 2.28
VEGFA-209ENST00000425836 TRIM34Q9BYJ4 488 aa29.26■■■□□ 2.28
VEGFA-209ENST00000425836 DDX60LQ5H9U9 1706 aaKnown RBP29.26■■■□□ 2.27
VEGFA-209ENST00000425836 VGLL4Q14135 290 aa29.26■■■□□ 2.27
VEGFA-209ENST00000425836 CYP4F22Q6NT55 531 aa29.26■■■□□ 2.27
VEGFA-209ENST00000425836 SLC10A4Q96EP9 437 aa29.26■■■□□ 2.27
VEGFA-209ENST00000425836 NAPBQ9H115 298 aa29.26■■■□□ 2.27
VEGFA-209ENST00000425836 AK9Q5TCS8 1911 aa29.25■■■□□ 2.27
VEGFA-209ENST00000425836 ALX1Q15699 326 aa29.25■■■□□ 2.27
VEGFA-209ENST00000425836 PAXIP1Q6ZW49 1069 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-209ENST00000425836 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.25■■■□□ 2.27
VEGFA-209ENST00000425836 CSADQ9Y600 493 aa29.25■■■□□ 2.27
VEGFA-209ENST00000425836 SGSM2O43147 1006 aa29.24■■■□□ 2.27
VEGFA-209ENST00000425836 RRP1BQ14684 758 aaKnown RBP29.24■■■□□ 2.27
VEGFA-209ENST00000425836 DNAJC5GQ8N7S2 189 aa29.24■■■□□ 2.27
VEGFA-209ENST00000425836 DYNLL2Q96FJ2 89 aa29.24■■■□□ 2.27
VEGFA-209ENST00000425836 MINDY4BA8MYZ0 360 aa29.23■■■□□ 2.27
VEGFA-209ENST00000425836 ELP3Q9H9T3 547 aa29.23■■■□□ 2.27
VEGFA-209ENST00000425836 SNCAIPQ9Y6H5 919 aa29.23■■■□□ 2.27
VEGFA-209ENST00000425836 NAV1Q8NEY1 1877 aa29.23■■■□□ 2.27
VEGFA-209ENST00000425836 CTNND1O60716 968 aaKnown RBP29.22■■■□□ 2.27
VEGFA-209ENST00000425836 CDC45O75419 566 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 FGAP02671 866 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 NOL9Q5SY16 702 aaKnown RBP29.22■■■□□ 2.27
VEGFA-209ENST00000425836 CAPNS2Q96L46 248 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 SIPA1L1O43166 1804 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 MYH1P12882 1939 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 FAM155AB1AL88 458 aaPredicted RBP29.22■■■□□ 2.27
VEGFA-209ENST00000425836 VEGFBP49765 207 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 TATDN1Q6P1N9 297 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 RASAL3Q86YV0 1011 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 CCDC102AQ96A19 550 aa29.22■■■□□ 2.27
VEGFA-209ENST00000425836 SLC10A3P09131 477 aa29.21■■■□□ 2.27
VEGFA-209ENST00000425836 SHMT1P34896 483 aa29.21■■■□□ 2.27
VEGFA-209ENST00000425836 GRM1Q13255 1194 aa29.21■■■□□ 2.27
VEGFA-209ENST00000425836 SLC44A5Q8NCS7 719 aa29.21■■■□□ 2.27
VEGFA-209ENST00000425836 TAOK2Q9UL54 1235 aa29.21■■■□□ 2.27
VEGFA-209ENST00000425836 CAP2P40123 477 aa29.2■■■□□ 2.26
VEGFA-209ENST00000425836 ECE1P42892 770 aa29.2■■■□□ 2.26
VEGFA-209ENST00000425836 SCYL3Q8IZE3 742 aa29.2■■■□□ 2.26
VEGFA-209ENST00000425836 ESYT1Q9BSJ8 1104 aa29.2■■■□□ 2.26
VEGFA-209ENST00000425836 DSCC1Q9BVC3 393 aa29.2■■■□□ 2.26
VEGFA-209ENST00000425836 C16orf86Q6ZW13 317 aa29.19■■■□□ 2.26
VEGFA-209ENST00000425836 SWAP70Q9UH65 585 aa29.19■■■□□ 2.26
VEGFA-209ENST00000425836 WDR33Q9C0J8 1336 aaKnown RBP29.19■■■□□ 2.26
VEGFA-209ENST00000425836 CNKSR2Q8WXI2 1034 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 ZMYM6O95789 1325 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 CDK8P49336 464 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 JAG1P78504 1218 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 PPARAQ07869 468 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 CASC1Q6TDU7 716 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 OPTNQ96CV9 577 aa29.18■■■□□ 2.26
VEGFA-209ENST00000425836 ROBO3Q96MS0 1386 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 BAZ2AQ9UIF9 1905 aaKnown RBP29.17■■■□□ 2.26
VEGFA-209ENST00000425836 SPDYE5A6NIY4 337 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 GDF11O95390 407 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 GJA5P36382 358 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 CERKLQ49MI3 558 aaPredicted RBP29.17■■■□□ 2.26
VEGFA-209ENST00000425836 SPRYD7Q5W111 196 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 ERO1BQ86YB8 467 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 STK11IPQ8N1F8 1099 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 WNK4Q96J92 1243 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 PICK1Q9NRD5 415 aa29.17■■■□□ 2.26
VEGFA-209ENST00000425836 PTH1RQ03431 593 aa29.16■■■□□ 2.26
VEGFA-209ENST00000425836 SHROOM1Q2M3G4 852 aaPredicted RBP29.16■■■□□ 2.26
VEGFA-209ENST00000425836 AOC2O75106 756 aa29.15■■■□□ 2.26
VEGFA-209ENST00000425836 PTPRAP18433 802 aa29.15■■■□□ 2.26
VEGFA-209ENST00000425836 MKRN3Q13064 507 aaKnown RBP29.15■■■□□ 2.26
VEGFA-209ENST00000425836 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms