RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CHAMP1Q96JM3 812 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
ACTB-204ENST00000425660 ZNF646O15015 1829 aaPredicted RBP17.8■□□□□ 0.44
ACTB-204ENST00000425660 TNKSO95271 1327 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 CCDC69A6NI79 296 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 NFXL1Q6ZNB6 911 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 IQCA1Q86XH1 822 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 AMOTL1Q8IY63 956 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 FBXW7Q969H0 707 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 ZSCAN10Q96SZ4 725 aaPredicted RBP17.79■□□□□ 0.44
ACTB-204ENST00000425660 ZKSCAN3Q9BRR0 538 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 MXD3Q9BW11 206 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 VPS33BQ9H267 617 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 USP17L3A6NCW0 530 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 USP17L4A6NCW7 530 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 CPLX1O14810 134 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 PRDM1O75626 825 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 HDLBPQ00341 1268 aaKnown RBP17.79■□□□□ 0.44
ACTB-204ENST00000425660 USP17L1Q7RTZ2 530 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 ENAHQ8N8S7 591 aaPredicted RBP17.79■□□□□ 0.44
ACTB-204ENST00000425660 TMEM87AQ8NBN3 555 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 FAM217BQ9NTX9 383 aaPredicted RBP17.79■□□□□ 0.44
ACTB-204ENST00000425660 NAV1Q8NEY1 1877 aa17.79■□□□□ 0.44
ACTB-204ENST00000425660 SCN9AQ15858 1988 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 RANBP6O60518 1105 aaKnown RBP17.78■□□□□ 0.44
ACTB-204ENST00000425660 NTRK3Q16288 839 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 KLHL40Q2TBA0 621 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 SOGA3Q5TF21 947 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 MICU3Q86XE3 530 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 MAPKAPK5Q8IW41 473 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 TEKT1Q969V4 418 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 SGIP1Q9BQI5 828 aa17.78■□□□□ 0.44
ACTB-204ENST00000425660 PPIP5K2O43314 1243 aa17.77■□□□□ 0.44
ACTB-204ENST00000425660 CDKL5O76039 1030 aa17.77■□□□□ 0.44
ACTB-204ENST00000425660 CDC27P30260 824 aa17.77■□□□□ 0.44
ACTB-204ENST00000425660 ADD1P35611 737 aaKnown RBP17.77■□□□□ 0.44
ACTB-204ENST00000425660 SYNE3Q6ZMZ3 975 aa17.77■□□□□ 0.44
ACTB-204ENST00000425660 ZDHHC15Q96MV8 337 aa17.77■□□□□ 0.44
ACTB-204ENST00000425660 FOCADQ5VW36 1801 aa17.77■□□□□ 0.43
ACTB-204ENST00000425660 F8W031 263 aaPredicted RBP17.77■□□□□ 0.43
ACTB-204ENST00000425660 PRPF40AO75400 957 aaKnown RBP17.77■□□□□ 0.43
ACTB-204ENST00000425660 PLCD1P51178 756 aa17.77■□□□□ 0.43
ACTB-204ENST00000425660 PPP2R5BQ15173 497 aa17.77■□□□□ 0.43
ACTB-204ENST00000425660 APOBEC3HQ6NTF7 200 aaKnown RBP17.77■□□□□ 0.43
ACTB-204ENST00000425660 RAB11FIP4Q86YS3 637 aa17.77■□□□□ 0.43
ACTB-204ENST00000425660 PIM2Q9P1W9 311 aa17.77■□□□□ 0.43
ACTB-204ENST00000425660 GOLGA8AA7E2F4 631 aa17.76■□□□□ 0.43
ACTB-204ENST00000425660 YDJCA8MPS7 323 aa17.76■□□□□ 0.43
ACTB-204ENST00000425660 WDHD1O75717 1129 aaPredicted RBP17.76■□□□□ 0.43
ACTB-204ENST00000425660 GSE1Q14687 1217 aa17.76■□□□□ 0.43
ACTB-204ENST00000425660 CPLX2Q6PUV4 134 aaKnown RBP17.76■□□□□ 0.43
ACTB-204ENST00000425660 ZNF654Q8IZM8 581 aa17.76■□□□□ 0.43
ACTB-204ENST00000425660 H3BQV1 296 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 POLR3DP05423 398 aaPredicted RBP17.75■□□□□ 0.43
ACTB-204ENST00000425660 RXRAP19793 462 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 CRKP46108 304 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 ZSCAN16Q9H4T2 348 aaPredicted RBP17.75■□□□□ 0.43
ACTB-204ENST00000425660 ZNF287Q9HBT7 754 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 ORC3Q9UBD5 711 aaPredicted RBP17.75■□□□□ 0.43
ACTB-204ENST00000425660 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 SCNN1DP51172 638 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 RESTQ13127 1097 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
ACTB-204ENST00000425660 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 SERPINA10Q9UK55 444 aa17.75■□□□□ 0.43
ACTB-204ENST00000425660 STK36Q9NRP7 1315 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 TSPY2A6NKD2 308 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 IFNAR1P17181 557 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
ACTB-204ENST00000425660 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
ACTB-204ENST00000425660 CDC42EP5Q6NZY7 148 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
ACTB-204ENST00000425660 FERMT3Q86UX7 667 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 KIAA0825Q8IV33 1275 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 FANCBQ8NB91 859 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 TCP11L1Q9NUJ3 509 aa17.74■□□□□ 0.43
ACTB-204ENST00000425660 SAP30BPQ9UHR5 308 aaKnown RBP17.74■□□□□ 0.43
ACTB-204ENST00000425660 DDX49Q9Y6V7 483 aaKnown RBP17.74■□□□□ 0.43
ACTB-204ENST00000425660 PTGER2P43116 358 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 TROAPQ12815 778 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 RTN1Q16799 776 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 FAM47AQ5JRC9 791 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 ANKS1AQ92625 1134 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 USP40Q9NVE5 1235 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 CNPY2Q9Y2B0 182 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 CD2APQ9Y5K6 639 aa17.73■□□□□ 0.43
ACTB-204ENST00000425660 BRCA1P38398 1863 aaKnown RBP17.72■□□□□ 0.43
ACTB-204ENST00000425660 PPFIA3O75145 1194 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 DDAH1O94760 285 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 CALM1P0DP23 149 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 CALM2P0DP24 149 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 CALM3P0DP25 149 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 RCSD1Q6JBY9 416 aa17.72■□□□□ 0.43
ACTB-204ENST00000425660 DGKHQ86XP1 1220 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 177.8 ms