RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 PRAMEF27A3QJZ7 478 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 CCDC85CA6NKD9 419 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 SLC22A31A6NKX4 558 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 UPK3BL1B0FP48 263 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 UPK3BL2E5RIL1 263 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 TMPRSS2O15393 492 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 HSP90B1P14625 803 aaKnown RBP7.05□□□□□ -1.28
LINC00400-201ENST00000425609 NTF4P34130 210 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 GMPRP36959 345 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 ERVK-24P63145 666 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 PDE4BQ07343 736 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 CDCP2Q5VXM1 449 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 LARP1BQ659C4 914 aaKnown RBP7.05□□□□□ -1.28
LINC00400-201ENST00000425609 ZSCAN1Q8NBB4 408 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 ATG4CQ96DT6 458 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 TMPRSS13Q9BYE2 586 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 WNT10AQ9GZT5 417 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 CNNM2Q9H8M5 875 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 HIF3AQ9Y2N7 669 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 CSADQ9Y600 493 aa7.05□□□□□ -1.28
LINC00400-201ENST00000425609 A0A0A0MRY4 1105 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 B2RBV5 119 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 TNFRSF10CO14798 259 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 PDPK1O15530 556 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 WISP1O95388 367 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 GJB6O95452 261 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 NME1P15531 152 aaKnown RBP7.04□□□□□ -1.28
LINC00400-201ENST00000425609 GRK4P32298 578 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 ZYXQ15942 572 aaKnown RBP7.04□□□□□ -1.28
LINC00400-201ENST00000425609 PPP2R5EQ16537 467 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 EXOSC6Q5RKV6 272 aaKnown RBP7.04□□□□□ -1.28
LINC00400-201ENST00000425609 INTS3Q68E01 1043 aaKnown RBP7.04□□□□□ -1.28
LINC00400-201ENST00000425609 NLRC3Q7RTR2 1065 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 FMR1NBQ8N0W7 255 aaPredicted RBP7.04□□□□□ -1.28
LINC00400-201ENST00000425609 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 ACSF2Q96CM8 615 aaPredicted RBP7.04□□□□□ -1.28
LINC00400-201ENST00000425609 TRIM11Q96F44 468 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 PPP1R9AQ9ULJ8 1098 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 SBNO2Q9Y2G9 1366 aa7.04□□□□□ -1.28
LINC00400-201ENST00000425609 ANKRD62A6NC57 917 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 PGRP06401 933 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 SLFN14P0C7P3 912 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 HSD3B2P26439 372 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 ID3Q02535 119 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 PPM1JQ5JR12 505 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 TRAPPC3LQ5T215 181 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 ZBTB37Q5TC79 503 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 MRM1Q6IN84 353 aaKnown RBP7.03□□□□□ -1.28
LINC00400-201ENST00000425609 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 DNAJC7Q99615 494 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 KANSL2Q9H9L4 492 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 CRIM1Q9NZV1 1036 aa7.03□□□□□ -1.28
LINC00400-201ENST00000425609 LTBP3Q9NS15 1303 aa7.02□□□□□ -1.28
LINC00400-201ENST00000425609 MEGF11A6BM72 1044 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 FANCGO15287 622 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 MLECQ14165 292 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 ZNF385CQ66K41 422 aaPredicted RBP7.02□□□□□ -1.29
LINC00400-201ENST00000425609 C6orf15Q6UXA7 325 aaPredicted RBP7.02□□□□□ -1.29
LINC00400-201ENST00000425609 UNC5AQ6ZN44 842 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 KIAA1211Q6ZU35 1233 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 FAM178BQ8IXR5 827 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 SLC9A7Q96T83 725 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
LINC00400-201ENST00000425609 SLC12A7Q9Y666 1083 aa7.02□□□□□ -1.29
LINC00400-201ENST00000425609 CHURC1-FNTBB4DL54 471 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 DUOXA2Q1HG44 320 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 ARSHQ5FYA8 562 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 LINC00114Q6XXX2 140 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 SH3TC2Q8TF17 1288 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 FANCD2OSQ96PS1 177 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 RUSC1Q9BVN2 902 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 SUGCTQ9HAC7 445 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 DISC1Q9NRI5 854 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 TJP2Q9UDY2 1190 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 KLHL3Q9UH77 587 aa7.01□□□□□ -1.29
LINC00400-201ENST00000425609 DDAH1O94760 285 aa7□□□□□ -1.29
LINC00400-201ENST00000425609 HMGB1P09429 215 aaKnown RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 NCLP19338 710 aaKnown RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 ETF1P62495 437 aaKnown RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 IFRD2Q12894 506 aaPredicted RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 AKAP4Q5JQC9 854 aa7□□□□□ -1.29
LINC00400-201ENST00000425609 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 MCATQ8IVS2 390 aaKnown RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 MRPL41Q8IXM3 137 aaKnown RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 SLFN12Q8IYM2 578 aa7□□□□□ -1.29
LINC00400-201ENST00000425609 JMYQ8N9B5 988 aa7□□□□□ -1.29
LINC00400-201ENST00000425609 RNF214Q8ND24 703 aa7□□□□□ -1.29
LINC00400-201ENST00000425609 GSX1Q9H4S2 264 aaPredicted RBP7□□□□□ -1.29
LINC00400-201ENST00000425609 FBRSQ9HAH7 460 aa7□□□□□ -1.29
LINC00400-201ENST00000425609 TIAF1O95411 115 aa6.99□□□□□ -1.29
LINC00400-201ENST00000425609 NEFMP07197 916 aa6.99□□□□□ -1.29
LINC00400-201ENST00000425609 ADH5P11766 374 aa6.99□□□□□ -1.29
LINC00400-201ENST00000425609 POLR2BP30876 1174 aaKnown RBP6.99□□□□□ -1.29
LINC00400-201ENST00000425609 RAC1P63000 192 aa6.99□□□□□ -1.29
LINC00400-201ENST00000425609 SNRPNP63162 240 aaKnown RBP6.99□□□□□ -1.29
LINC00400-201ENST00000425609 MTERF2Q49AM1 385 aa6.99□□□□□ -1.29
LINC00400-201ENST00000425609 PLEKHG4Q58EX7 1191 aa6.99□□□□□ -1.29
LINC00400-201ENST00000425609 ACAD11Q709F0 780 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms