RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 SAP30BPQ9UHR5 308 aaKnown RBP8.45□□□□□ -1.06
LSM8-204ENST00000424702 CLRN2A0PK11 232 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 FGAP02671 866 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 CYP21A2P08686 494 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 GJB2P29033 226 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 EPHX2P34913 555 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 HMGN5P82970 282 aaKnown RBP8.45□□□□□ -1.06
LSM8-204ENST00000424702 WTAPQ15007 396 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 ZNF526Q8TF50 670 aaPredicted RBP8.45□□□□□ -1.06
LSM8-204ENST00000424702 IL25Q9H293 177 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 TCEAL9Q9UHQ7 104 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 GOLGA8BA8MQT2 603 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 E7EWF7 191 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 TRAK2O60296 914 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 PRDX5P30044 214 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 DDX11Q96FC9 970 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 BEGAINQ9BUH8 593 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 MYOZ2Q9NPC6 264 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 SEC63Q9UGP8 760 aaKnown RBP8.45□□□□□ -1.06
LSM8-204ENST00000424702 SLC12A7Q9Y666 1083 aa8.45□□□□□ -1.06
LSM8-204ENST00000424702 VIL1P09327 827 aaKnown RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 TCP10Q12799 353 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 SLFNL1Q499Z3 407 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 CDC37L1Q7L3B6 337 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 KRT26Q7Z3Y9 468 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 TMEM87BQ96K49 555 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 CSRNP1Q96S65 589 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 MPHOSPH6Q99547 160 aaKnown RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 HERC5Q9UII4 1024 aaKnown RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 DAGLAQ9Y4D2 1042 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 CCT2P78371 535 aaKnown RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 PPARAQ07869 468 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 RAB3GAP1Q15042 981 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 DACT2Q5SW24 774 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 FKBP1CQ5VVH2 108 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 CHST3Q7LGC8 479 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 NUP133Q8WUM0 1156 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 CCDC34Q96HJ3 373 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 EHMT1Q9H9B1 1298 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 KLF18A0A0U1RQI7 1052 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 STX6O43752 255 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 PPP4CP60510 307 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 SAMD1Q6SPF0 538 aaPredicted RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 IFNL3Q8IZI9 196 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 CCDC12Q8WUD4 166 aaPredicted RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 NSUN4Q96CB9 384 aaKnown RBP8.44□□□□□ -1.06
LSM8-204ENST00000424702 ZDHHC15Q96MV8 337 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 SERPINB13Q9UIV8 391 aa8.44□□□□□ -1.06
LSM8-204ENST00000424702 MARCH6O60337 910 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 SF3A1Q15459 793 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 ALX1Q15699 326 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 IFIT1BQ5T764 474 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 AK9Q5TCS8 1911 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 USP17L21D6R901 530 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 PRPF40AO75400 957 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 USP14P54578 494 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 APOBRQ0VD83 1088 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 ARHGEF6Q15052 776 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 AKNAD1Q5T1N1 836 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 FAM151AQ8WW52 585 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 ZNF70Q9UC06 446 aaPredicted RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 STX8Q9UNK0 236 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 MTMR7Q9Y216 660 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 GPR75-ASB3A0A0A6YYF3 556 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 GLTPD2A6NH11 291 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 GOLGA8AA7E2F4 631 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 B4DLN1 442 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 MRPL12P52815 198 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 GSE1Q14687 1217 aa8.43□□□□□ -1.06
LSM8-204ENST00000424702 ZRSR1Q15695 479 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 L1TD1Q5T7N2 865 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 TDRD3Q9H7E2 651 aaKnown RBP8.43□□□□□ -1.06
LSM8-204ENST00000424702 CHGBP05060 677 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 PPP2R5BQ15173 497 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 CERKLQ49MI3 558 aaPredicted RBP8.42□□□□□ -1.06
LSM8-204ENST00000424702 B4E1Z4 1266 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 NFKBIEO00221 500 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 BAG4O95429 457 aaKnown RBP8.42□□□□□ -1.06
LSM8-204ENST00000424702 MBD3O95983 291 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 DEKP35659 375 aaKnown RBP8.42□□□□□ -1.06
LSM8-204ENST00000424702 STRBPQ96SI9 672 aaKnown RBP8.42□□□□□ -1.06
LSM8-204ENST00000424702 GGA3Q9NZ52 723 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 GPRC5DQ9NZD1 345 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 KDM4AO75164 1064 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 ASNSP08243 561 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 METAP2P50579 478 aaKnown RBP eCLIP8.42□□□□□ -1.06
LSM8-204ENST00000424702 KRT85P78386 507 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 ABCB5Q2M3G0 1257 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 FAM83AQ86UY5 434 aa8.42□□□□□ -1.06
LSM8-204ENST00000424702 FAM163AQ96GL9 167 aaPredicted RBP8.42□□□□□ -1.06
LSM8-204ENST00000424702 ZBTB43O43298 467 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 FIBPO43427 364 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 CUL4AQ13619 759 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 OLFM4Q6UX06 510 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 LDHDQ86WU2 507 aa8.41□□□□□ -1.06
LSM8-204ENST00000424702 MICU3Q86XE3 530 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms