RNA–Protein interactions for RNA: ENST00000423105.5

NIFK-202, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 3

Gene NIFK, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-202ENST00000423105 GRIN3AQ8TCU5 1115 aa7.05□□□□□ -1.28
NIFK-202ENST00000423105 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
NIFK-202ENST00000423105 ACSBG1Q96GR2 724 aa7.05□□□□□ -1.28
NIFK-202ENST00000423105 PPP1R9AQ9ULJ8 1098 aa7.05□□□□□ -1.28
NIFK-202ENST00000423105 PCDHGC5Q9Y5F6 944 aa7.05□□□□□ -1.28
NIFK-202ENST00000423105 OAS3Q9Y6K5 1087 aaKnown RBP7.05□□□□□ -1.28
NIFK-202ENST00000423105 CUX1P39880 1505 aa7.05□□□□□ -1.28
NIFK-202ENST00000423105 ZNF16P17020 682 aaPredicted RBP7.04□□□□□ -1.28
NIFK-202ENST00000423105 NFKBIBQ15653 356 aa7.04□□□□□ -1.28
NIFK-202ENST00000423105 ZC3H12AQ5D1E8 599 aaKnown RBP7.04□□□□□ -1.28
NIFK-202ENST00000423105 GIMAP7Q8NHV1 300 aa7.04□□□□□ -1.28
NIFK-202ENST00000423105 FBLIM1Q8WUP2 373 aa7.04□□□□□ -1.28
NIFK-202ENST00000423105 DBNDD2Q9BQY9 259 aa7.04□□□□□ -1.28
NIFK-202ENST00000423105 FAM105AQ9NUU6 356 aa7.04□□□□□ -1.28
NIFK-202ENST00000423105 SHROOM2Q13796 1616 aa7.04□□□□□ -1.28
NIFK-202ENST00000423105 LMNB1P20700 586 aa7.03□□□□□ -1.28
NIFK-202ENST00000423105 ERVK-24P63145 666 aa7.03□□□□□ -1.28
NIFK-202ENST00000423105 FANCD2OSQ96PS1 177 aa7.03□□□□□ -1.28
NIFK-202ENST00000423105 ACSS3Q9H6R3 686 aa7.03□□□□□ -1.28
NIFK-202ENST00000423105 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 ERICH3Q5RHP9 1530 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 RBM47A0AV96 593 aaKnown RBP7.02□□□□□ -1.29
NIFK-202ENST00000423105 SSTR4P31391 388 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 LIG3P49916 1009 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 AGMOQ6ZNB7 445 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 SEMA6CQ9H3T2 930 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 PIDD1Q9HB75 910 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 DISC1Q9NRI5 854 aa7.02□□□□□ -1.29
NIFK-202ENST00000423105 FHAD1B1AJZ9 1412 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 CEP170Q5SW79 1584 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 NFICP08651 508 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 RAB6AP20340 208 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
NIFK-202ENST00000423105 RASIP1Q5U651 963 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 DIEXFQ68CQ4 756 aaKnown RBP7.01□□□□□ -1.29
NIFK-202ENST00000423105 MPRIPQ6WCQ1 1025 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 RNF214Q8ND24 703 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 PCDHA4Q9UN74 947 aa7.01□□□□□ -1.29
NIFK-202ENST00000423105 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
NIFK-202ENST00000423105 CD97P48960 835 aa7□□□□□ -1.29
NIFK-202ENST00000423105 PWP1Q13610 501 aa7□□□□□ -1.29
NIFK-202ENST00000423105 SMYD4Q8IYR2 804 aaPredicted RBP7□□□□□ -1.29
NIFK-202ENST00000423105 RSRP1Q9BUV0 290 aa7□□□□□ -1.29
NIFK-202ENST00000423105 PCOLCE2Q9UKZ9 415 aa7□□□□□ -1.29
NIFK-202ENST00000423105 SNCAIPQ9Y6H5 919 aa7□□□□□ -1.29
NIFK-202ENST00000423105 RNGTTO60942 597 aaKnown RBP6.99□□□□□ -1.29
NIFK-202ENST00000423105 MED26O95402 600 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 TTLL4Q14679 1199 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 CPSF6Q16630 551 aaKnown RBP eCLIP6.99□□□□□ -1.29
NIFK-202ENST00000423105 HDXQ7Z353 690 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 RELL1Q8IUW5 271 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 MIR1-1HGQ9H1L0 117 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 PRKAG2Q9UGJ0 569 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 CCDC9Q9Y3X0 531 aaKnown RBP6.99□□□□□ -1.29
NIFK-202ENST00000423105 DAGLAQ9Y4D2 1042 aa6.99□□□□□ -1.29
NIFK-202ENST00000423105 FANCGO15287 622 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 RING1Q06587 406 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 MAP3K11Q16584 847 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 ZAR1Q86SH2 424 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 CCDC84Q86UT8 332 aaPredicted RBP6.98□□□□□ -1.29
NIFK-202ENST00000423105 ZDHHC13Q8IUH4 622 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 SHKBP1Q8TBC3 707 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 TBC1D32Q96NH3 1257 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 METTL22Q9BUU2 404 aaPredicted RBP6.98□□□□□ -1.29
NIFK-202ENST00000423105 ATG3Q9NT62 314 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 ABCC10Q5T3U5 1492 aa6.98□□□□□ -1.29
NIFK-202ENST00000423105 DCDC2CA8MYV0 355 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 HCLS1P14317 486 aaPredicted RBP6.97□□□□□ -1.29
NIFK-202ENST00000423105 CYP27A1Q02318 531 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 SEZ6L2Q6UXD5 910 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 FBXL6Q8N531 539 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 KCT2Q8NC54 265 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 PHC3Q8NDX5 983 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 GAL3ST3Q96A11 431 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 ELMO3Q96BJ8 720 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 SSU72Q9NP77 194 aaKnown RBP6.97□□□□□ -1.29
NIFK-202ENST00000423105 PICK1Q9NRD5 415 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 PCDHB5Q9Y5E4 795 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 TACC3Q9Y6A5 838 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 BIVM-ERCC5R4GMW8 1640 aa6.97□□□□□ -1.29
NIFK-202ENST00000423105 RUSC2Q8N2Y8 1516 aa6.96□□□□□ -1.29
NIFK-202ENST00000423105 DIP2BQ9P265 1576 aa6.96□□□□□ -1.29
NIFK-202ENST00000423105 WDR64B1ANS9 1081 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 ADAMTS4O75173 837 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 TFE3P19532 575 aaPredicted RBP6.96□□□□□ -1.3
NIFK-202ENST00000423105 GP2P55259 537 aaKnown RBP6.96□□□□□ -1.3
NIFK-202ENST00000423105 PTPN11Q06124 597 aaPredicted RBP6.96□□□□□ -1.3
NIFK-202ENST00000423105 TSNAXIP1Q2TAA8 658 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 PPM1JQ5JR12 505 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 KRTAP5-3Q6L8H2 238 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 C12orf40Q86WS4 652 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 ISL2Q96A47 359 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 TMEM74Q96NL1 305 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 C1GALT1Q9NS00 363 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 TLR6Q9Y2C9 796 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 KDM6BO15054 1643 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 TOP2BQ02880 1626 aa6.96□□□□□ -1.3
NIFK-202ENST00000423105 KIF13AQ9H1H9 1805 aa6.95□□□□□ -1.3
NIFK-202ENST00000423105 PRR19A6NJB7 356 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms